Gene : Glyma.17G017900 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR16007//PTHR16007:SF29 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED Genomic Order:  179
Name:  ? Glyma.17G017900 Secondary Identifier:  ? PAC:30482196
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G017900 0.5kb upstream 0.5kb upstream 1272   true Chr17: 1354199-1355470 Glycine max
Glyma.17G017900 0.5kb upstream 0.5kb upstream 500   false Chr17: 1354971-1355470 Glycine max
Glyma.17G017900 0.5kb downstream 0.5kb downstream 1272   true Chr17: 1353699-1354970 Glycine max
Glyma.17G017900 0.5kb downstream 0.5kb downstream 500   false Chr17: 1353699-1354198 Glycine max
Glyma.17G017900 1.0kb upstream 1.0kb upstream 1772   true Chr17: 1354199-1355970 Glycine max
Glyma.17G017900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 1354971-1355970 Glycine max
Glyma.17G017900 1.0kb downstream 1.0kb downstream 1772   true Chr17: 1353199-1354970 Glycine max
Glyma.17G017900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 1353199-1354198 Glycine max
Glyma.17G017900 2.0kb upstream 2.0kb upstream 2772   true Chr17: 1354199-1356970 Glycine max
Glyma.17G017900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 1354971-1356970 Glycine max
Glyma.17G017900 2.0kb downstream 2.0kb downstream 2772   true Chr17: 1352199-1354970 Glycine max
Glyma.17G017900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 1352199-1354198 Glycine max
Glyma.17G017900 5.0kb upstream 5.0kb upstream 5772   true Chr17: 1354199-1359970 Glycine max
Glyma.17G017900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 1354971-1359970 Glycine max
Glyma.17G017900 5.0kb downstream 5.0kb downstream 5772   true Chr17: 1349199-1354970 Glycine max
Glyma.17G017900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 1349199-1354198 Glycine max
Glyma.17G017900 10.0kb upstream 10.0kb upstream 10772   true Chr17: 1354199-1364970 Glycine max
Glyma.17G017900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 1354971-1364970 Glycine max
Glyma.17G017900 10.0kb downstream 10.0kb downstream 10772   true Chr17: 1344199-1354970 Glycine max
Glyma.17G017900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 1344199-1354198 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029799 5273 Angiosperm View MSA
122312915 5265 Fabidae View MSA
124062949 5270 Rosid View MSA
123736459 5271 Pentapetalae View MSA
122791594 5272 Eudicot View MSA
121299075 5274 Embryophyte View MSA
123336998 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0536793 0.0 1.33519 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.174769 0.0 3.33834 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.125       High
cufflinks 0.021     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.051     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.053     Low  

0 Strain