Gene : Glyma.17G019200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33294:SF3 - AWPM-19-LIKE PROTEIN Genomic Order:  192
Name:  ? Glyma.17G019200 Secondary Identifier:  ? PAC:30482414
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G019200 0.5kb upstream 0.5kb upstream 1611   true Chr17: 1439728-1441338 Glycine max
Glyma.17G019200 0.5kb upstream 0.5kb upstream 500   false Chr17: 1439728-1440227 Glycine max
Glyma.17G019200 0.5kb downstream 0.5kb downstream 1611   true Chr17: 1440228-1441838 Glycine max
Glyma.17G019200 0.5kb downstream 0.5kb downstream 500   false Chr17: 1441339-1441838 Glycine max
Glyma.17G019200 1.0kb upstream 1.0kb upstream 2111   true Chr17: 1439228-1441338 Glycine max
Glyma.17G019200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 1439228-1440227 Glycine max
Glyma.17G019200 1.0kb downstream 1.0kb downstream 2111   true Chr17: 1440228-1442338 Glycine max
Glyma.17G019200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 1441339-1442338 Glycine max
Glyma.17G019200 2.0kb upstream 2.0kb upstream 3111   true Chr17: 1438228-1441338 Glycine max
Glyma.17G019200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 1438228-1440227 Glycine max
Glyma.17G019200 2.0kb downstream 2.0kb downstream 3111   true Chr17: 1440228-1443338 Glycine max
Glyma.17G019200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 1441339-1443338 Glycine max
Glyma.17G019200 5.0kb upstream 5.0kb upstream 6111   true Chr17: 1435228-1441338 Glycine max
Glyma.17G019200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 1435228-1440227 Glycine max
Glyma.17G019200 5.0kb downstream 5.0kb downstream 6111   true Chr17: 1440228-1446338 Glycine max
Glyma.17G019200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 1441339-1446338 Glycine max
Glyma.17G019200 10.0kb upstream 10.0kb upstream 11111   true Chr17: 1430228-1441338 Glycine max
Glyma.17G019200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 1430228-1440227 Glycine max
Glyma.17G019200 10.0kb downstream 10.0kb downstream 11111   true Chr17: 1440228-1451338 Glycine max
Glyma.17G019200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 1441339-1451338 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301109 5265 Fabidae View MSA
124066796 5270 Rosid View MSA
123736510 5271 Pentapetalae View MSA
122792358 5272 Eudicot View MSA
122050396 5273 Angiosperm View MSA
121349282 5274 Embryophyte View MSA
123381254 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.86007 0.0 3.26454   Low
cufflinks 1.31302 0.0 4.88954    
cufflinks 2.34715 0.0 8.4347    
cufflinks 1.73778 0.0 6.36571    
cufflinks 3.91983 0.0 13.5209    
cufflinks 2.63269 0.0 9.40745    
cufflinks 0.505263 0.0 1.96   Low
cufflinks 5.42815 0.0 18.0288   High
cufflinks 5.46825 0.0 18.1611   High
cufflinks 7.915     High High
cufflinks 1.811        
cufflinks 1.206        
cufflinks 6.099       High
cufflinks 2.065        
cufflinks 0.087       Low
cufflinks 1.987        
cufflinks 3.49        
cufflinks 3.925        
cufflinks 0.619       Low
cufflinks 2.025        
cufflinks 3.374        
cufflinks 2.218        
cufflinks 1.378        
cufflinks 1.597        
cufflinks 2.272        
cufflinks 2.704        

0 Strain