Gene : Glyma.17G021100 G. max Wm82.a2.v1
Genomic Order:  211 Name:  ? Glyma.17G021100
Secondary Identifier:  ? PAC:30478542
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G021100 0.5kb upstream 0.5kb upstream 4116   true Chr17: 1554190-1558305 Glycine max
Glyma.17G021100 0.5kb upstream 0.5kb upstream 500   false Chr17: 1554190-1554689 Glycine max
Glyma.17G021100 0.5kb downstream 0.5kb downstream 4116   true Chr17: 1554690-1558805 Glycine max
Glyma.17G021100 0.5kb downstream 0.5kb downstream 500   false Chr17: 1558306-1558805 Glycine max
Glyma.17G021100 1.0kb upstream 1.0kb upstream 4616   true Chr17: 1553690-1558305 Glycine max
Glyma.17G021100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 1553690-1554689 Glycine max
Glyma.17G021100 1.0kb downstream 1.0kb downstream 4616   true Chr17: 1554690-1559305 Glycine max
Glyma.17G021100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 1558306-1559305 Glycine max
Glyma.17G021100 2.0kb upstream 2.0kb upstream 5616   true Chr17: 1552690-1558305 Glycine max
Glyma.17G021100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 1552690-1554689 Glycine max
Glyma.17G021100 2.0kb downstream 2.0kb downstream 5616   true Chr17: 1554690-1560305 Glycine max
Glyma.17G021100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 1558306-1560305 Glycine max
Glyma.17G021100 5.0kb upstream 5.0kb upstream 8616   true Chr17: 1549690-1558305 Glycine max
Glyma.17G021100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 1549690-1554689 Glycine max
Glyma.17G021100 5.0kb downstream 5.0kb downstream 8616   true Chr17: 1554690-1563305 Glycine max
Glyma.17G021100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 1558306-1563305 Glycine max
Glyma.17G021100 10.0kb upstream 10.0kb upstream 13616   true Chr17: 1544690-1558305 Glycine max
Glyma.17G021100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 1544690-1554689 Glycine max
Glyma.17G021100 10.0kb downstream 10.0kb downstream 13616   true Chr17: 1554690-1568305 Glycine max
Glyma.17G021100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 1558306-1568305 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026247 5273 Angiosperm View MSA
122311665 5265 Fabidae View MSA
124062678 5270 Rosid View MSA
123751382 5271 Pentapetalae View MSA
122788871 5272 Eudicot View MSA
121349608 5274 Embryophyte View MSA
123425538 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.2852 0.0 123.811 High High
cufflinks 24.8775 0.0 66.3949 High  
cufflinks 26.0694 0.0 69.6044 High  
cufflinks 30.0705 0.0 80.5588 High  
cufflinks 9.10975 0.0 25.3284   Low
cufflinks 20.827 0.0 55.5924    
cufflinks 11.7324 0.0 32.0267   Low
cufflinks 21.4167 0.0 57.1463 High  
cufflinks 13.6644 0.0 36.9321    
cufflinks 12.211     High  
cufflinks 9.35     High  
cufflinks 8.796     High  
cufflinks 2.794       Low
cufflinks 0.448       Low
cufflinks 6.004     High  
cufflinks 13.853     High  
cufflinks 6.051        
cufflinks 9.114     High  
cufflinks 11.281     High  
cufflinks 15.059     High  
cufflinks 10.556     High  
cufflinks 15.21     High  
cufflinks 8.942     High  
cufflinks 9.831     High  
cufflinks 12.972     High  
cufflinks 9.784     High  

0 Strain