Gene : Glyma.17G009500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11216//PTHR11216:SF76 - EH DOMAIN Genomic Order:  95
Name:  ? Glyma.17G009500 Secondary Identifier:  ? PAC:30481458
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G009500 0.5kb upstream 0.5kb upstream 5218   true Chr17: 764970-770187 Glycine max
Glyma.17G009500 0.5kb upstream 0.5kb upstream 500   false Chr17: 769688-770187 Glycine max
Glyma.17G009500 0.5kb downstream 0.5kb downstream 5218   true Chr17: 764470-769687 Glycine max
Glyma.17G009500 0.5kb downstream 0.5kb downstream 500   false Chr17: 764470-764969 Glycine max
Glyma.17G009500 1.0kb upstream 1.0kb upstream 5718   true Chr17: 764970-770687 Glycine max
Glyma.17G009500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 769688-770687 Glycine max
Glyma.17G009500 1.0kb downstream 1.0kb downstream 5718   true Chr17: 763970-769687 Glycine max
Glyma.17G009500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 763970-764969 Glycine max
Glyma.17G009500 2.0kb upstream 2.0kb upstream 6718   true Chr17: 764970-771687 Glycine max
Glyma.17G009500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 769688-771687 Glycine max
Glyma.17G009500 2.0kb downstream 2.0kb downstream 6718   true Chr17: 762970-769687 Glycine max
Glyma.17G009500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 762970-764969 Glycine max
Glyma.17G009500 5.0kb upstream 5.0kb upstream 9718   true Chr17: 764970-774687 Glycine max
Glyma.17G009500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 769688-774687 Glycine max
Glyma.17G009500 5.0kb downstream 5.0kb downstream 9718   true Chr17: 759970-769687 Glycine max
Glyma.17G009500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 759970-764969 Glycine max
Glyma.17G009500 10.0kb upstream 10.0kb upstream 14718   true Chr17: 764970-779687 Glycine max
Glyma.17G009500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 769688-779687 Glycine max
Glyma.17G009500 10.0kb downstream 10.0kb downstream 14718   true Chr17: 754970-769687 Glycine max
Glyma.17G009500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 754970-764969 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310215 5265 Fabidae View MSA
124069320 5270 Rosid View MSA
123743696 5271 Pentapetalae View MSA
122797625 5272 Eudicot View MSA
122047763 5273 Angiosperm View MSA
123428944 5275 Viridiplantae View MSA
121344712 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.12557 0.0 9.47367   Low
cufflinks 4.83771 0.0 13.8103    
cufflinks 2.13435 0.0 6.79088   Low
cufflinks 5.10778 0.0 14.4926    
cufflinks 5.92694 0.0 16.6007    
cufflinks 5.29309 0.0 14.9911    
cufflinks 4.7879 0.0 13.7565    
cufflinks 4.81579 0.0 13.7522    
cufflinks 4.64052 0.0 13.3188    
cufflinks 2.658        
cufflinks 0.328       Low
cufflinks 1.457        
cufflinks 3.76       High
cufflinks 4.599       High
cufflinks 0.219       Low
cufflinks 2.13        
cufflinks 0.861        
cufflinks 1.284        
cufflinks 3.121        
cufflinks 1.597        
cufflinks 0.916        
cufflinks 1.998        
cufflinks 2.653        
cufflinks 0.664        
cufflinks 1.536        
cufflinks 1.039        

0 Strain