Gene : Glyma.17G010200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11850:SF100 - HOMEOBOX PROTEIN SHOOT MERISTEMLESS Genomic Order:  102
Name:  ? Glyma.17G010200 Secondary Identifier:  ? PAC:30480835
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G010200 0.5kb upstream 0.5kb upstream 5896   true Chr17: 827436-833331 Glycine max
Glyma.17G010200 0.5kb upstream 0.5kb upstream 500   false Chr17: 827436-827935 Glycine max
Glyma.17G010200 0.5kb downstream 0.5kb downstream 5896   true Chr17: 827936-833831 Glycine max
Glyma.17G010200 0.5kb downstream 0.5kb downstream 500   false Chr17: 833332-833831 Glycine max
Glyma.17G010200 1.0kb upstream 1.0kb upstream 6396   true Chr17: 826936-833331 Glycine max
Glyma.17G010200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 826936-827935 Glycine max
Glyma.17G010200 1.0kb downstream 1.0kb downstream 6396   true Chr17: 827936-834331 Glycine max
Glyma.17G010200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 833332-834331 Glycine max
Glyma.17G010200 2.0kb upstream 2.0kb upstream 7396   true Chr17: 825936-833331 Glycine max
Glyma.17G010200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 825936-827935 Glycine max
Glyma.17G010200 2.0kb downstream 2.0kb downstream 7396   true Chr17: 827936-835331 Glycine max
Glyma.17G010200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 833332-835331 Glycine max
Glyma.17G010200 5.0kb upstream 5.0kb upstream 10396   true Chr17: 822936-833331 Glycine max
Glyma.17G010200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 822936-827935 Glycine max
Glyma.17G010200 5.0kb downstream 5.0kb downstream 10396   true Chr17: 827936-838331 Glycine max
Glyma.17G010200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 833332-838331 Glycine max
Glyma.17G010200 10.0kb upstream 10.0kb upstream 15396   true Chr17: 817936-833331 Glycine max
Glyma.17G010200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 817936-827935 Glycine max
Glyma.17G010200 10.0kb downstream 10.0kb downstream 15396   true Chr17: 827936-843331 Glycine max
Glyma.17G010200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 833332-843331 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122244185 5265 Fabidae Singleton cluster - no MSA
124072037 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0113811 0.0 0.0514711 Low Low
cufflinks 0.198221 0.0 0.761463 Low  
cufflinks 0.112514 0.0 0.441965 Low  
cufflinks 0.839383 0.0 2.98649    
cufflinks 0.950819 0.0 3.35676    
cufflinks 0.0637115 0.0 0.255767 Low  
cufflinks 1.66806 0.0 5.55801    
cufflinks 12.6918 0.0 33.962   High
cufflinks 1.22025 0.0 4.21173    
cufflinks 0.33        
cufflinks 0.006     Low Low
cufflinks 0.278        
cufflinks 0.024     Low  
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.291        
cufflinks 0.293        
cufflinks 0.132        
cufflinks 0.052     Low  
cufflinks 0.171        
cufflinks 0.051     Low  
cufflinks 0.227        
cufflinks 0.157        
cufflinks 0.04     Low  
cufflinks 0.254        
cufflinks 0.071        

0 Strain