Gene : Glyma.17G010800 G. max Wm82.a2.v1
Defline:  (1 of 4) 6.1.1.4 - Leucine--tRNA ligase / Leucyl-tRNA synthetase Genomic Order:  108
Name:  ? Glyma.17G010800 Secondary Identifier:  ? PAC:30479062
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax TRNA-CHARGING-PWY Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G010800 0.5kb upstream 0.5kb upstream 8143   true Chr17: 874934-883076 Glycine max
Glyma.17G010800 0.5kb upstream 0.5kb upstream 500   false Chr17: 874934-875433 Glycine max
Glyma.17G010800 0.5kb downstream 0.5kb downstream 8143   true Chr17: 875434-883576 Glycine max
Glyma.17G010800 0.5kb downstream 0.5kb downstream 500   false Chr17: 883077-883576 Glycine max
Glyma.17G010800 1.0kb upstream 1.0kb upstream 8643   true Chr17: 874434-883076 Glycine max
Glyma.17G010800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 874434-875433 Glycine max
Glyma.17G010800 1.0kb downstream 1.0kb downstream 8643   true Chr17: 875434-884076 Glycine max
Glyma.17G010800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 883077-884076 Glycine max
Glyma.17G010800 2.0kb upstream 2.0kb upstream 9643   true Chr17: 873434-883076 Glycine max
Glyma.17G010800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 873434-875433 Glycine max
Glyma.17G010800 2.0kb downstream 2.0kb downstream 9643   true Chr17: 875434-885076 Glycine max
Glyma.17G010800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 883077-885076 Glycine max
Glyma.17G010800 5.0kb upstream 5.0kb upstream 12643   true Chr17: 870434-883076 Glycine max
Glyma.17G010800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 870434-875433 Glycine max
Glyma.17G010800 5.0kb downstream 5.0kb downstream 12643   true Chr17: 875434-888076 Glycine max
Glyma.17G010800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 883077-888076 Glycine max
Glyma.17G010800 10.0kb upstream 10.0kb upstream 17643   true Chr17: 865434-883076 Glycine max
Glyma.17G010800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 865434-875433 Glycine max
Glyma.17G010800 10.0kb downstream 10.0kb downstream 17643   true Chr17: 875434-893076 Glycine max
Glyma.17G010800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 883077-893076 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041369 5273 Angiosperm View MSA
122306893 5265 Fabidae View MSA
124073421 5270 Rosid View MSA
123749958 5271 Pentapetalae View MSA
122789048 5272 Eudicot View MSA
121347479 5274 Embryophyte View MSA
123424257 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.689358 0.0 2.44098    
cufflinks 1.23054 0.0 4.11849   High
cufflinks 0.562661 0.0 2.018    
cufflinks 0.470816 0.0 1.71074    
cufflinks 0.905468 0.0 3.13292    
cufflinks 0.541922 0.0 1.95138    
cufflinks 0.475776 0.0 1.72842    
cufflinks 0.483729 0.0 1.75459    
cufflinks 0.916562 0.0 3.1664    
cufflinks 0.409        
cufflinks 0.202       Low
cufflinks 0.891        
cufflinks 0.631        
cufflinks 1.019        
cufflinks 0.762        
cufflinks 2.039       High
cufflinks 0.149       Low
cufflinks 0.719        
cufflinks 1.649        
cufflinks 1.775        
cufflinks 0.246       Low
cufflinks 2.023       High
cufflinks 2.349       High
cufflinks 0.307        
cufflinks 1.904       High
cufflinks 0.206       Low

0 Strain