Gene : Glyma.17G012000 G. max Wm82.a2.v1
Defline:  (1 of 5) 2.1.2.10 - Aminomethyltransferase / Tetrahydrofolate aminomethyltransferase Genomic Order:  120
Name:  ? Glyma.17G012000 Secondary Identifier:  ? PAC:30479873
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLYCLEAV-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G012000 0.5kb upstream 0.5kb upstream 3373   true Chr17: 938469-941841 Glycine max
Glyma.17G012000 0.5kb upstream 0.5kb upstream 500   false Chr17: 941342-941841 Glycine max
Glyma.17G012000 0.5kb downstream 0.5kb downstream 3373   true Chr17: 937969-941341 Glycine max
Glyma.17G012000 0.5kb downstream 0.5kb downstream 500   false Chr17: 937969-938468 Glycine max
Glyma.17G012000 1.0kb upstream 1.0kb upstream 3873   true Chr17: 938469-942341 Glycine max
Glyma.17G012000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 941342-942341 Glycine max
Glyma.17G012000 1.0kb downstream 1.0kb downstream 3873   true Chr17: 937469-941341 Glycine max
Glyma.17G012000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 937469-938468 Glycine max
Glyma.17G012000 2.0kb upstream 2.0kb upstream 4873   true Chr17: 938469-943341 Glycine max
Glyma.17G012000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 941342-943341 Glycine max
Glyma.17G012000 2.0kb downstream 2.0kb downstream 4873   true Chr17: 936469-941341 Glycine max
Glyma.17G012000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 936469-938468 Glycine max
Glyma.17G012000 5.0kb upstream 5.0kb upstream 7873   true Chr17: 938469-946341 Glycine max
Glyma.17G012000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 941342-946341 Glycine max
Glyma.17G012000 5.0kb downstream 5.0kb downstream 7873   true Chr17: 933469-941341 Glycine max
Glyma.17G012000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 933469-938468 Glycine max
Glyma.17G012000 10.0kb upstream 10.0kb upstream 12873   true Chr17: 938469-951341 Glycine max
Glyma.17G012000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 941342-951341 Glycine max
Glyma.17G012000 10.0kb downstream 10.0kb downstream 12873   true Chr17: 928469-941341 Glycine max
Glyma.17G012000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 928469-938468 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304206 5265 Fabidae View MSA
124063348 5270 Rosid View MSA
123743205 5271 Pentapetalae View MSA
122791059 5272 Eudicot View MSA
122045036 5273 Angiosperm View MSA
121345728 5274 Embryophyte View MSA
123424844 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 87.8369 0.0 504.899 High High
cufflinks 39.6915 0.0 160.38 High  
cufflinks 5.86989 0.0 22.735   Low
cufflinks 35.8982 0.0 142.425 High  
cufflinks 16.0158 0.0 53.9653    
cufflinks 15.2498 0.0 51.6502    
cufflinks 19.2472 0.0 71.9337    
cufflinks 23.8832 0.0 91.8668 High  
cufflinks 12.7267 0.0 48.9817    
cufflinks 4.74        
cufflinks 0.641       Low
cufflinks 1.652        
cufflinks 2.62        
cufflinks 2.825        
cufflinks 0.272       Low
cufflinks 26.581     High High
cufflinks 0.607       Low
cufflinks 2.636        
cufflinks 6.324        
cufflinks 35.258     High High
cufflinks 0.773        
cufflinks 27.675     High High
cufflinks 20.369     High High
cufflinks 0.988        
cufflinks 31.846     High High
cufflinks 0.994        

0 Strain