Gene : Glyma.17G012700 G. max Wm82.a2.v1
Defline:  (1 of 6) 2.4.2.10 - Orotate phosphoribosyltransferase / Orotidylic acid phosphorylase Genomic Order:  127
Name:  ? Glyma.17G012700 Secondary Identifier:  ? PAC:30480703
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-162 Glycine max pathologic  
Gmax PWY-5686 Glycine max pathologic  
Gmax PWY-7211 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G012700 0.5kb upstream 0.5kb upstream 2723   true Chr17: 981116-983838 Glycine max
Glyma.17G012700 0.5kb upstream 0.5kb upstream 500   false Chr17: 983339-983838 Glycine max
Glyma.17G012700 0.5kb downstream 0.5kb downstream 2723   true Chr17: 980616-983338 Glycine max
Glyma.17G012700 0.5kb downstream 0.5kb downstream 500   false Chr17: 980616-981115 Glycine max
Glyma.17G012700 1.0kb upstream 1.0kb upstream 3223   true Chr17: 981116-984338 Glycine max
Glyma.17G012700 1.0kb upstream 1.0kb upstream 1000   false Chr17: 983339-984338 Glycine max
Glyma.17G012700 1.0kb downstream 1.0kb downstream 3223   true Chr17: 980116-983338 Glycine max
Glyma.17G012700 1.0kb downstream 1.0kb downstream 1000   false Chr17: 980116-981115 Glycine max
Glyma.17G012700 2.0kb upstream 2.0kb upstream 4223   true Chr17: 981116-985338 Glycine max
Glyma.17G012700 2.0kb upstream 2.0kb upstream 2000   false Chr17: 983339-985338 Glycine max
Glyma.17G012700 2.0kb downstream 2.0kb downstream 4223   true Chr17: 979116-983338 Glycine max
Glyma.17G012700 2.0kb downstream 2.0kb downstream 2000   false Chr17: 979116-981115 Glycine max
Glyma.17G012700 5.0kb upstream 5.0kb upstream 7223   true Chr17: 981116-988338 Glycine max
Glyma.17G012700 5.0kb upstream 5.0kb upstream 5000   false Chr17: 983339-988338 Glycine max
Glyma.17G012700 5.0kb downstream 5.0kb downstream 7223   true Chr17: 976116-983338 Glycine max
Glyma.17G012700 5.0kb downstream 5.0kb downstream 5000   false Chr17: 976116-981115 Glycine max
Glyma.17G012700 10.0kb upstream 10.0kb upstream 12223   true Chr17: 981116-993338 Glycine max
Glyma.17G012700 10.0kb upstream 10.0kb upstream 10000   false Chr17: 983339-993338 Glycine max
Glyma.17G012700 10.0kb downstream 10.0kb downstream 12223   true Chr17: 971116-983338 Glycine max
Glyma.17G012700 10.0kb downstream 10.0kb downstream 10000   false Chr17: 971116-981115 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315962 5265 Fabidae View MSA
124039241 5270 Rosid View MSA
123751852 5271 Pentapetalae View MSA
122789079 5272 Eudicot View MSA
122042153 5273 Angiosperm View MSA
121351237 5274 Embryophyte View MSA
123424950 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.514146 0.0 1.93775    
cufflinks 0.618656 0.0 2.31014    
cufflinks 0.327988 0.0 1.25914   Low
cufflinks 1.22659 0.0 4.40766   High
cufflinks 0.957153 0.0 3.49392    
cufflinks 0.52614 0.0 1.97992    
cufflinks 0.833559 0.0 3.06866    
cufflinks 1.40181 0.0 4.98125   High
cufflinks 0.676495 0.0 2.5123    
cufflinks 3.968        
cufflinks 0.401       Low
cufflinks 2.033        
cufflinks 3.148        
cufflinks 3.862        
cufflinks 1.694        
cufflinks 3.099        
cufflinks 0.931       Low
cufflinks 3.825        
cufflinks 3.114        
cufflinks 2.629        
cufflinks 0.769       Low
cufflinks 3.206        
cufflinks 3.279        
cufflinks 0.755       Low
cufflinks 2.896        
cufflinks 1.114        

0 Strain