Gene : Glyma.17G013800 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR24349:SF89 - CALCIUM-DEPENDENT PROTEIN KINASE 29 Genomic Order:  138
Name:  ? Glyma.17G013800 Secondary Identifier:  ? PAC:30481295
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G013800 0.5kb upstream 0.5kb upstream 5091   true Chr17: 1047240-1052330 Glycine max
Glyma.17G013800 0.5kb upstream 0.5kb upstream 500   false Chr17: 1051831-1052330 Glycine max
Glyma.17G013800 0.5kb downstream 0.5kb downstream 5091   true Chr17: 1046740-1051830 Glycine max
Glyma.17G013800 0.5kb downstream 0.5kb downstream 500   false Chr17: 1046740-1047239 Glycine max
Glyma.17G013800 1.0kb upstream 1.0kb upstream 5591   true Chr17: 1047240-1052830 Glycine max
Glyma.17G013800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 1051831-1052830 Glycine max
Glyma.17G013800 1.0kb downstream 1.0kb downstream 5591   true Chr17: 1046240-1051830 Glycine max
Glyma.17G013800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 1046240-1047239 Glycine max
Glyma.17G013800 2.0kb upstream 2.0kb upstream 6591   true Chr17: 1047240-1053830 Glycine max
Glyma.17G013800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 1051831-1053830 Glycine max
Glyma.17G013800 2.0kb downstream 2.0kb downstream 6591   true Chr17: 1045240-1051830 Glycine max
Glyma.17G013800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 1045240-1047239 Glycine max
Glyma.17G013800 5.0kb upstream 5.0kb upstream 9591   true Chr17: 1047240-1056830 Glycine max
Glyma.17G013800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 1051831-1056830 Glycine max
Glyma.17G013800 5.0kb downstream 5.0kb downstream 9591   true Chr17: 1042240-1051830 Glycine max
Glyma.17G013800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 1042240-1047239 Glycine max
Glyma.17G013800 10.0kb upstream 10.0kb upstream 14591   true Chr17: 1047240-1061830 Glycine max
Glyma.17G013800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 1051831-1061830 Glycine max
Glyma.17G013800 10.0kb downstream 10.0kb downstream 14591   true Chr17: 1037240-1051830 Glycine max
Glyma.17G013800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 1037240-1047239 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304470 5265 Fabidae View MSA
124069145 5270 Rosid View MSA
123751027 5271 Pentapetalae View MSA
122788788 5272 Eudicot View MSA
122048153 5273 Angiosperm View MSA
121310867 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.83528 0.0 10.978   Low
cufflinks 16.4578 0.0 44.0708    
cufflinks 4.1759 0.0 11.8072   Low
cufflinks 22.9071 0.0 62.3514 High  
cufflinks 26.1428 0.0 71.7963 High  
cufflinks 8.66959 0.0 23.2872    
cufflinks 64.6559 0.0 199.492 High High
cufflinks 27.3929 0.0 75.5109 High  
cufflinks 17.1835 0.0 46.0793    
cufflinks 13.549     High High
cufflinks 1.88       Low
cufflinks 6.187        
cufflinks 14.755     High High
cufflinks 23.027     High High
cufflinks 4.398        
cufflinks 6.03        
cufflinks 4.706        
cufflinks 8.143     High  
cufflinks 10.128     High  
cufflinks 5.787        
cufflinks 3.315        
cufflinks 5.434        
cufflinks 6.028        
cufflinks 1.603       Low
cufflinks 5.454        
cufflinks 4.77        

0 Strain