Gene : Glyma.17G053600 G. max Wm82.a2.v1
Genomic Order:  536 Name:  ? Glyma.17G053600
Secondary Identifier:  ? PAC:30479333
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G053600 0.5kb upstream 0.5kb upstream 4133   true Chr17: 4076879-4081011 Glycine max
Glyma.17G053600 0.5kb upstream 0.5kb upstream 500   false Chr17: 4080512-4081011 Glycine max
Glyma.17G053600 0.5kb downstream 0.5kb downstream 4133   true Chr17: 4076379-4080511 Glycine max
Glyma.17G053600 0.5kb downstream 0.5kb downstream 500   false Chr17: 4076379-4076878 Glycine max
Glyma.17G053600 1.0kb upstream 1.0kb upstream 4633   true Chr17: 4076879-4081511 Glycine max
Glyma.17G053600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 4080512-4081511 Glycine max
Glyma.17G053600 1.0kb downstream 1.0kb downstream 4633   true Chr17: 4075879-4080511 Glycine max
Glyma.17G053600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 4075879-4076878 Glycine max
Glyma.17G053600 2.0kb upstream 2.0kb upstream 5633   true Chr17: 4076879-4082511 Glycine max
Glyma.17G053600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 4080512-4082511 Glycine max
Glyma.17G053600 2.0kb downstream 2.0kb downstream 5633   true Chr17: 4074879-4080511 Glycine max
Glyma.17G053600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 4074879-4076878 Glycine max
Glyma.17G053600 5.0kb upstream 5.0kb upstream 8633   true Chr17: 4076879-4085511 Glycine max
Glyma.17G053600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 4080512-4085511 Glycine max
Glyma.17G053600 5.0kb downstream 5.0kb downstream 8633   true Chr17: 4071879-4080511 Glycine max
Glyma.17G053600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 4071879-4076878 Glycine max
Glyma.17G053600 10.0kb upstream 10.0kb upstream 13633   true Chr17: 4076879-4090511 Glycine max
Glyma.17G053600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 4080512-4090511 Glycine max
Glyma.17G053600 10.0kb downstream 10.0kb downstream 13633   true Chr17: 4066879-4080511 Glycine max
Glyma.17G053600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 4066879-4076878 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313030 5265 Fabidae View MSA
124069504 5270 Rosid View MSA
123741985 5271 Pentapetalae View MSA
122797259 5272 Eudicot View MSA
122041581 5273 Angiosperm View MSA
121351725 5274 Embryophyte View MSA
123382293 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.98495 0.0 34.1866   High
cufflinks 0.233844 0.0 1.16532 Low  
cufflinks 1.0274 0.0 5.23669    
cufflinks 0.337515 0.0 1.59579    
cufflinks 0.40323 0.0 2.47916    
cufflinks 5.04503 0.0 18.7612   High
cufflinks 0.71068 0.0 3.92753    
cufflinks 0.114107 0.0 0.443214 Low Low
cufflinks 0.604981 0.0 2.63785    
cufflinks 4.001        
cufflinks 9.35     High High
cufflinks 3.233        
cufflinks 1.954        
cufflinks 0.4       Low
cufflinks 0.454       Low
cufflinks 1.829        
cufflinks 42.819     High High
cufflinks 1.137        
cufflinks 0.195       Low
cufflinks 2.607        
cufflinks 3.05        
cufflinks 1.828        
cufflinks 1.957        
cufflinks 10.514     High High
cufflinks 1.528        
cufflinks 8.763     High  

0 Strain