Gene : Glyma.17G054700 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG2476 - Uncharacterized conserved protein Genomic Order:  547
Name:  ? Glyma.17G054700 Secondary Identifier:  ? PAC:30479943
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G054700 0.5kb upstream 0.5kb upstream 3793   true Chr17: 4163188-4166980 Glycine max
Glyma.17G054700 0.5kb upstream 0.5kb upstream 500   false Chr17: 4163188-4163687 Glycine max
Glyma.17G054700 0.5kb downstream 0.5kb downstream 3793   true Chr17: 4163688-4167480 Glycine max
Glyma.17G054700 0.5kb downstream 0.5kb downstream 500   false Chr17: 4166981-4167480 Glycine max
Glyma.17G054700 1.0kb upstream 1.0kb upstream 4293   true Chr17: 4162688-4166980 Glycine max
Glyma.17G054700 1.0kb upstream 1.0kb upstream 1000   false Chr17: 4162688-4163687 Glycine max
Glyma.17G054700 1.0kb downstream 1.0kb downstream 4293   true Chr17: 4163688-4167980 Glycine max
Glyma.17G054700 1.0kb downstream 1.0kb downstream 1000   false Chr17: 4166981-4167980 Glycine max
Glyma.17G054700 2.0kb upstream 2.0kb upstream 5293   true Chr17: 4161688-4166980 Glycine max
Glyma.17G054700 2.0kb upstream 2.0kb upstream 2000   false Chr17: 4161688-4163687 Glycine max
Glyma.17G054700 2.0kb downstream 2.0kb downstream 5293   true Chr17: 4163688-4168980 Glycine max
Glyma.17G054700 2.0kb downstream 2.0kb downstream 2000   false Chr17: 4166981-4168980 Glycine max
Glyma.17G054700 5.0kb upstream 5.0kb upstream 8293   true Chr17: 4158688-4166980 Glycine max
Glyma.17G054700 5.0kb upstream 5.0kb upstream 5000   false Chr17: 4158688-4163687 Glycine max
Glyma.17G054700 5.0kb downstream 5.0kb downstream 8293   true Chr17: 4163688-4171980 Glycine max
Glyma.17G054700 5.0kb downstream 5.0kb downstream 5000   false Chr17: 4166981-4171980 Glycine max
Glyma.17G054700 10.0kb upstream 10.0kb upstream 13293   true Chr17: 4153688-4166980 Glycine max
Glyma.17G054700 10.0kb upstream 10.0kb upstream 10000   false Chr17: 4153688-4163687 Glycine max
Glyma.17G054700 10.0kb downstream 10.0kb downstream 13293   true Chr17: 4163688-4176980 Glycine max
Glyma.17G054700 10.0kb downstream 10.0kb downstream 10000   false Chr17: 4166981-4176980 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121611250 5273 Angiosperm Singleton cluster - no MSA
122244294 5265 Fabidae Singleton cluster - no MSA
123988637 5270 Rosid Singleton cluster - no MSA
123563803 5271 Pentapetalae Singleton cluster - no MSA
122598578 5272 Eudicot Singleton cluster - no MSA
120883483 5274 Embryophyte Singleton cluster - no MSA
123426244 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.18128 0.0 12.3878   High
cufflinks 3.6661 0.0 11.0842    
cufflinks 3.63832 0.0 10.9988    
cufflinks 3.33386 0.0 10.1938    
cufflinks 3.69931 0.0 11.1275    
cufflinks 2.41256 0.0 7.72499   Low
cufflinks 3.15123 0.0 9.71041    
cufflinks 3.9494 0.0 11.7854    
cufflinks 2.31115 0.0 7.44134   Low
cufflinks 1.753        
cufflinks 1.343       Low
cufflinks 2.28        
cufflinks 2.323        
cufflinks 2.699        
cufflinks 1.659        
cufflinks 2.563        
cufflinks 1.474       Low
cufflinks 2.249        
cufflinks 3.393       High
cufflinks 2.983       High
cufflinks 1.706        
cufflinks 3.037       High
cufflinks 2.935       High
cufflinks 1.428       Low
cufflinks 2.896        
cufflinks 1.52       Low

0 Strain