Gene : Glyma.17G055100 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR23421:SF74 - BETA-GALACTOSIDASE 1 Genomic Order:  551
Name:  ? Glyma.17G055100 Secondary Identifier:  ? PAC:30480172
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G055100 0.5kb upstream 0.5kb upstream 6249   true Chr17: 4184107-4190355 Glycine max
Glyma.17G055100 0.5kb upstream 0.5kb upstream 500   false Chr17: 4189856-4190355 Glycine max
Glyma.17G055100 0.5kb downstream 0.5kb downstream 6249   true Chr17: 4183607-4189855 Glycine max
Glyma.17G055100 0.5kb downstream 0.5kb downstream 500   false Chr17: 4183607-4184106 Glycine max
Glyma.17G055100 1.0kb upstream 1.0kb upstream 6749   true Chr17: 4184107-4190855 Glycine max
Glyma.17G055100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 4189856-4190855 Glycine max
Glyma.17G055100 1.0kb downstream 1.0kb downstream 6749   true Chr17: 4183107-4189855 Glycine max
Glyma.17G055100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 4183107-4184106 Glycine max
Glyma.17G055100 2.0kb upstream 2.0kb upstream 7749   true Chr17: 4184107-4191855 Glycine max
Glyma.17G055100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 4189856-4191855 Glycine max
Glyma.17G055100 2.0kb downstream 2.0kb downstream 7749   true Chr17: 4182107-4189855 Glycine max
Glyma.17G055100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 4182107-4184106 Glycine max
Glyma.17G055100 5.0kb upstream 5.0kb upstream 10749   true Chr17: 4184107-4194855 Glycine max
Glyma.17G055100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 4189856-4194855 Glycine max
Glyma.17G055100 5.0kb downstream 5.0kb downstream 10749   true Chr17: 4179107-4189855 Glycine max
Glyma.17G055100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 4179107-4184106 Glycine max
Glyma.17G055100 10.0kb upstream 10.0kb upstream 15749   true Chr17: 4184107-4199855 Glycine max
Glyma.17G055100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 4189856-4199855 Glycine max
Glyma.17G055100 10.0kb downstream 10.0kb downstream 15749   true Chr17: 4174107-4189855 Glycine max
Glyma.17G055100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 4174107-4184106 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313819 5265 Fabidae View MSA
124070593 5270 Rosid View MSA
123743472 5271 Pentapetalae View MSA
122770672 5272 Eudicot View MSA
122049621 5273 Angiosperm View MSA
121350261 5274 Embryophyte View MSA
123428653 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.988391 0.0 3.61129    
cufflinks 1.25878 0.0 4.35638    
cufflinks 1.39763 0.0 6.00174    
cufflinks 7.0368 0.0 24.5192   High
cufflinks 2.12231 0.0 8.09396    
cufflinks 3.63747 0.0 11.9487    
cufflinks 8.48256 0.0 29.1177   High
cufflinks 0.709322 0.0 3.78352   Low
cufflinks 3.52522 0.0 13.5403    
cufflinks 1.687       High
cufflinks 0.512        
cufflinks 0.482        
cufflinks 2.044       High
cufflinks 0.81        
cufflinks 0.15       Low
cufflinks 1.411        
cufflinks 0.872        
cufflinks 0.66        
cufflinks 0.656        
cufflinks 0.924        
cufflinks 0.627        
cufflinks 0.76        
cufflinks 1.042        
cufflinks 0.746        
cufflinks 1.01        
cufflinks 1.309        

0 Strain