Gene : Glyma.17G055200 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR10071//PTHR10071:SF191 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR Genomic Order:  552
Name:  ? Glyma.17G055200 Secondary Identifier:  ? PAC:30480520
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G055200 0.5kb upstream 0.5kb upstream 2650   true Chr17: 4202694-4205343 Glycine max
Glyma.17G055200 0.5kb upstream 0.5kb upstream 500   false Chr17: 4202694-4203193 Glycine max
Glyma.17G055200 0.5kb downstream 0.5kb downstream 2650   true Chr17: 4203194-4205843 Glycine max
Glyma.17G055200 0.5kb downstream 0.5kb downstream 500   false Chr17: 4205344-4205843 Glycine max
Glyma.17G055200 1.0kb upstream 1.0kb upstream 3150   true Chr17: 4202194-4205343 Glycine max
Glyma.17G055200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 4202194-4203193 Glycine max
Glyma.17G055200 1.0kb downstream 1.0kb downstream 3150   true Chr17: 4203194-4206343 Glycine max
Glyma.17G055200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 4205344-4206343 Glycine max
Glyma.17G055200 2.0kb upstream 2.0kb upstream 4150   true Chr17: 4201194-4205343 Glycine max
Glyma.17G055200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 4201194-4203193 Glycine max
Glyma.17G055200 2.0kb downstream 2.0kb downstream 4150   true Chr17: 4203194-4207343 Glycine max
Glyma.17G055200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 4205344-4207343 Glycine max
Glyma.17G055200 5.0kb upstream 5.0kb upstream 7150   true Chr17: 4198194-4205343 Glycine max
Glyma.17G055200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 4198194-4203193 Glycine max
Glyma.17G055200 5.0kb downstream 5.0kb downstream 7150   true Chr17: 4203194-4210343 Glycine max
Glyma.17G055200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 4205344-4210343 Glycine max
Glyma.17G055200 10.0kb upstream 10.0kb upstream 12150   true Chr17: 4193194-4205343 Glycine max
Glyma.17G055200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 4193194-4203193 Glycine max
Glyma.17G055200 10.0kb downstream 10.0kb downstream 12150   true Chr17: 4203194-4215343 Glycine max
Glyma.17G055200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 4205344-4215343 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299809 5265 Fabidae View MSA
124071935 5270 Rosid View MSA
123749447 5271 Pentapetalae View MSA
122796147 5272 Eudicot View MSA
122045626 5273 Angiosperm View MSA
121350500 5274 Embryophyte View MSA
123428177 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.162 0.0 95.8557 High High
cufflinks 6.20703 0.0 24.696    
cufflinks 3.26817 0.0 10.2416    
cufflinks 0.959169 0.0 5.93021    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.314004 0.0 1.56576   Low
cufflinks 2.89299 0.0 12.5594    
cufflinks 1.1599 0.0 6.72918    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.044     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.869        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 8.971     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.57        
cufflinks 1.19        
cufflinks 12.948     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 9.958     High  
cufflinks 7.694     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 8.53     High  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain