Gene : Glyma.17G056200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR32285:SF8 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 5 Genomic Order:  562
Name:  ? Glyma.17G056200 Secondary Identifier:  ? PAC:30479906
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G056200 0.5kb upstream 0.5kb upstream 5189   true Chr17: 4262908-4268096 Glycine max
Glyma.17G056200 0.5kb upstream 0.5kb upstream 500   false Chr17: 4262908-4263407 Glycine max
Glyma.17G056200 0.5kb downstream 0.5kb downstream 5189   true Chr17: 4263408-4268596 Glycine max
Glyma.17G056200 0.5kb downstream 0.5kb downstream 500   false Chr17: 4268097-4268596 Glycine max
Glyma.17G056200 1.0kb upstream 1.0kb upstream 5689   true Chr17: 4262408-4268096 Glycine max
Glyma.17G056200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 4262408-4263407 Glycine max
Glyma.17G056200 1.0kb downstream 1.0kb downstream 5689   true Chr17: 4263408-4269096 Glycine max
Glyma.17G056200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 4268097-4269096 Glycine max
Glyma.17G056200 2.0kb upstream 2.0kb upstream 6689   true Chr17: 4261408-4268096 Glycine max
Glyma.17G056200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 4261408-4263407 Glycine max
Glyma.17G056200 2.0kb downstream 2.0kb downstream 6689   true Chr17: 4263408-4270096 Glycine max
Glyma.17G056200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 4268097-4270096 Glycine max
Glyma.17G056200 5.0kb upstream 5.0kb upstream 9689   true Chr17: 4258408-4268096 Glycine max
Glyma.17G056200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 4258408-4263407 Glycine max
Glyma.17G056200 5.0kb downstream 5.0kb downstream 9689   true Chr17: 4263408-4273096 Glycine max
Glyma.17G056200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 4268097-4273096 Glycine max
Glyma.17G056200 10.0kb upstream 10.0kb upstream 14689   true Chr17: 4253408-4268096 Glycine max
Glyma.17G056200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 4253408-4263407 Glycine max
Glyma.17G056200 10.0kb downstream 10.0kb downstream 14689   true Chr17: 4263408-4278096 Glycine max
Glyma.17G056200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 4268097-4278096 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306135 5265 Fabidae View MSA
124064796 5270 Rosid View MSA
123739697 5271 Pentapetalae View MSA
122792275 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.56616 0.0 5.26458   Low
cufflinks 5.26154 0.0 15.0337    
cufflinks 1.08401 0.0 3.78279   Low
cufflinks 6.17284 0.0 17.3103    
cufflinks 6.74197 0.0 18.7527    
cufflinks 4.18104 0.0 12.2828    
cufflinks 6.042 0.0 17.0006    
cufflinks 5.46685 0.0 15.5147    
cufflinks 4.54548 0.0 13.2041    
cufflinks 3.329       High
cufflinks 0.456       Low
cufflinks 1.282        
cufflinks 3.361       High
cufflinks 4.991       High
cufflinks 1.053        
cufflinks 1.618        
cufflinks 0.769        
cufflinks 2.144        
cufflinks 2.757        
cufflinks 1.327        
cufflinks 1.033        
cufflinks 1.326        
cufflinks 2.285        
cufflinks 0.454       Low
cufflinks 1.183        
cufflinks 1.022        

0 Strain