Gene : Glyma.17G057300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31752:SF4 - AUXIN EFFLUX CARRIER COMPONENT 2 Genomic Order:  573
Name:  ? Glyma.17G057300 Secondary Identifier:  ? PAC:30482475
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G057300 0.5kb upstream 0.5kb upstream 5894   true Chr17: 4337652-4343545 Glycine max
Glyma.17G057300 0.5kb upstream 0.5kb upstream 500   false Chr17: 4337652-4338151 Glycine max
Glyma.17G057300 0.5kb downstream 0.5kb downstream 5894   true Chr17: 4338152-4344045 Glycine max
Glyma.17G057300 0.5kb downstream 0.5kb downstream 500   false Chr17: 4343546-4344045 Glycine max
Glyma.17G057300 1.0kb upstream 1.0kb upstream 6394   true Chr17: 4337152-4343545 Glycine max
Glyma.17G057300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 4337152-4338151 Glycine max
Glyma.17G057300 1.0kb downstream 1.0kb downstream 6394   true Chr17: 4338152-4344545 Glycine max
Glyma.17G057300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 4343546-4344545 Glycine max
Glyma.17G057300 2.0kb upstream 2.0kb upstream 7394   true Chr17: 4336152-4343545 Glycine max
Glyma.17G057300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 4336152-4338151 Glycine max
Glyma.17G057300 2.0kb downstream 2.0kb downstream 7394   true Chr17: 4338152-4345545 Glycine max
Glyma.17G057300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 4343546-4345545 Glycine max
Glyma.17G057300 5.0kb upstream 5.0kb upstream 10394   true Chr17: 4333152-4343545 Glycine max
Glyma.17G057300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 4333152-4338151 Glycine max
Glyma.17G057300 5.0kb downstream 5.0kb downstream 10394   true Chr17: 4338152-4348545 Glycine max
Glyma.17G057300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 4343546-4348545 Glycine max
Glyma.17G057300 10.0kb upstream 10.0kb upstream 15394   true Chr17: 4328152-4343545 Glycine max
Glyma.17G057300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 4328152-4338151 Glycine max
Glyma.17G057300 10.0kb downstream 10.0kb downstream 15394   true Chr17: 4338152-4353545 Glycine max
Glyma.17G057300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 4343546-4353545 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304711 5265 Fabidae View MSA
124063005 5270 Rosid View MSA
123747112 5271 Pentapetalae View MSA
122796951 5272 Eudicot View MSA
122046141 5273 Angiosperm View MSA
121351759 5274 Embryophyte View MSA
123382310 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.150915 0.0 1.05662 Low  
cufflinks 0.517096 0.0 2.33569    
cufflinks 0.113537 0.0 0.443491 Low  
cufflinks 21.8131 0.0 66.6215 High High
cufflinks 8.80322 0.0 32.0868    
cufflinks 3.27066 0.0 12.2315    
cufflinks 0.041708 0.0 0.172218 Low Low
cufflinks 9.63018 0.0 29.227    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.374        
cufflinks 0.168        
cufflinks 9.622     High High
cufflinks 14.273     High High
cufflinks 0.016     Low  
cufflinks 0.002     Low Low
cufflinks 0.541        
cufflinks 0.467        
cufflinks 0.027     Low  
cufflinks 0.002     Low Low
cufflinks 0.874        
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.34        
cufflinks 0.006     Low  
cufflinks 1.71        

0 Strain