Gene : Glyma.17G057800 G. max Wm82.a2.v1
Defline:  (1 of 8) PF00122//PF00689//PF00690//PF00702//PF12515 - E1-E2 ATPase (E1-E2_ATPase) // Cation transporting ATPase, C-terminus (Cation_ATPase_C) // Cation transporter/ATPase, N-terminus (Cation_ATPase_N) // haloacid dehalogenase-like hydrolase (Hydrolase) // Ca2+-ATPase N terminal autoinhibitory domain (CaATP_NAI) Genomic Order:  578
Name:  ? Glyma.17G057800 Secondary Identifier:  ? PAC:30481233
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G057800 0.5kb upstream 0.5kb upstream 26800   true Chr17: 4371206-4398005 Glycine max
Glyma.17G057800 0.5kb upstream 0.5kb upstream 500   false Chr17: 4397506-4398005 Glycine max
Glyma.17G057800 0.5kb downstream 0.5kb downstream 26800   true Chr17: 4370706-4397505 Glycine max
Glyma.17G057800 0.5kb downstream 0.5kb downstream 500   false Chr17: 4370706-4371205 Glycine max
Glyma.17G057800 1.0kb upstream 1.0kb upstream 27300   true Chr17: 4371206-4398505 Glycine max
Glyma.17G057800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 4397506-4398505 Glycine max
Glyma.17G057800 1.0kb downstream 1.0kb downstream 27300   true Chr17: 4370206-4397505 Glycine max
Glyma.17G057800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 4370206-4371205 Glycine max
Glyma.17G057800 2.0kb upstream 2.0kb upstream 28300   true Chr17: 4371206-4399505 Glycine max
Glyma.17G057800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 4397506-4399505 Glycine max
Glyma.17G057800 2.0kb downstream 2.0kb downstream 28300   true Chr17: 4369206-4397505 Glycine max
Glyma.17G057800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 4369206-4371205 Glycine max
Glyma.17G057800 5.0kb upstream 5.0kb upstream 31300   true Chr17: 4371206-4402505 Glycine max
Glyma.17G057800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 4397506-4402505 Glycine max
Glyma.17G057800 5.0kb downstream 5.0kb downstream 31300   true Chr17: 4366206-4397505 Glycine max
Glyma.17G057800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 4366206-4371205 Glycine max
Glyma.17G057800 10.0kb upstream 10.0kb upstream 36300   true Chr17: 4371206-4407505 Glycine max
Glyma.17G057800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 4397506-4407505 Glycine max
Glyma.17G057800 10.0kb downstream 10.0kb downstream 36300   true Chr17: 4361206-4397505 Glycine max
Glyma.17G057800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 4361206-4371205 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121618158 5273 Angiosperm View MSA
122255135 5265 Fabidae View MSA
123996986 5270 Rosid View MSA
123571354 5271 Pentapetalae View MSA
122606080 5272 Eudicot View MSA
120890272 5274 Embryophyte View MSA
123428805 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.34779 0.0 38.3247    
cufflinks 6.98573 0.0 25.8132    
cufflinks 38.7637 0.0 197.63 High High
cufflinks 28.214 0.0 124.285 High High
cufflinks 2.25142 0.0 13.7983   Low
cufflinks 2.47067 0.0 14.9152   Low
cufflinks 5.46789 0.0 20.948    
cufflinks 8.58307 0.0 34.2253    
cufflinks 4.27718 0.0 21.2732    
cufflinks 0.597        
cufflinks 0.094        
cufflinks 2.375       High
cufflinks 0.147        
cufflinks 0.054     Low Low
cufflinks 0.166        
cufflinks 0.158        
cufflinks 0.403        
cufflinks 2.509       High
cufflinks 1.25       High
cufflinks 0.172        
cufflinks 0.128        
cufflinks 0.209        
cufflinks 0.488        
cufflinks 0.082       Low
cufflinks 0.192        
cufflinks 0.247        

0 Strain