Gene : Glyma.17G059100 G. max Wm82.a2.v1
Defline:  (1 of 68) PF06203 - CCT motif (CCT) Genomic Order:  591
Name:  ? Glyma.17G059100 Secondary Identifier:  ? PAC:30479196
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G059100 0.5kb upstream 0.5kb upstream 4374   true Chr17: 4486093-4490466 Glycine max
Glyma.17G059100 0.5kb upstream 0.5kb upstream 500   false Chr17: 4486093-4486592 Glycine max
Glyma.17G059100 0.5kb downstream 0.5kb downstream 4374   true Chr17: 4486593-4490966 Glycine max
Glyma.17G059100 0.5kb downstream 0.5kb downstream 500   false Chr17: 4490467-4490966 Glycine max
Glyma.17G059100 1.0kb upstream 1.0kb upstream 4874   true Chr17: 4485593-4490466 Glycine max
Glyma.17G059100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 4485593-4486592 Glycine max
Glyma.17G059100 1.0kb downstream 1.0kb downstream 4874   true Chr17: 4486593-4491466 Glycine max
Glyma.17G059100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 4490467-4491466 Glycine max
Glyma.17G059100 2.0kb upstream 2.0kb upstream 5874   true Chr17: 4484593-4490466 Glycine max
Glyma.17G059100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 4484593-4486592 Glycine max
Glyma.17G059100 2.0kb downstream 2.0kb downstream 5874   true Chr17: 4486593-4492466 Glycine max
Glyma.17G059100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 4490467-4492466 Glycine max
Glyma.17G059100 5.0kb upstream 5.0kb upstream 8874   true Chr17: 4481593-4490466 Glycine max
Glyma.17G059100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 4481593-4486592 Glycine max
Glyma.17G059100 5.0kb downstream 5.0kb downstream 8874   true Chr17: 4486593-4495466 Glycine max
Glyma.17G059100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 4490467-4495466 Glycine max
Glyma.17G059100 10.0kb upstream 10.0kb upstream 13874   true Chr17: 4476593-4490466 Glycine max
Glyma.17G059100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 4476593-4486592 Glycine max
Glyma.17G059100 10.0kb downstream 10.0kb downstream 13874   true Chr17: 4486593-4500466 Glycine max
Glyma.17G059100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 4490467-4500466 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302114 5265 Fabidae View MSA
124066149 5270 Rosid View MSA
123741675 5271 Pentapetalae View MSA
122787863 5272 Eudicot View MSA
122044342 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121310281 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.6908 0.0 136.528 High High
cufflinks 6.58196 0.0 23.2242    
cufflinks 3.07182 0.0 11.5765    
cufflinks 6.34875 0.0 24.1836    
cufflinks 2.94944 0.0 12.7144    
cufflinks 0.753149 0.0 4.86569   Low
cufflinks 0.379518 0.0 2.30996   Low
cufflinks 3.45023 0.0 14.27    
cufflinks 1.15248 0.0 6.79441    
cufflinks 0.546        
cufflinks 0.005     Low Low
cufflinks 1.208        
cufflinks 0.124        
cufflinks 0.034     Low  
cufflinks 0.211        
cufflinks 8.269     High High
cufflinks 0.067     Low  
cufflinks 0.729        
cufflinks 1.922        
cufflinks 10.041     High High
cufflinks 0.042     Low  
cufflinks 8.659     High High
cufflinks 9.935     High High
cufflinks 0.019     Low Low
cufflinks 7.322     High High
cufflinks 0.012     Low Low

0 Strain