Gene : Glyma.17G047000 G. max Wm82.a2.v1
Defline:  (1 of 3) 2.3.1.179 - Beta-ketoacyl-[acyl-carrier-protein] synthase II / KASII Genomic Order:  470
Name:  ? Glyma.17G047000 Secondary Identifier:  ? PAC:30481715
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5973 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G047000 0.5kb upstream 0.5kb upstream 7461   true Chr17: 3524452-3531912 Glycine max
Glyma.17G047000 0.5kb upstream 0.5kb upstream 500   false Chr17: 3531413-3531912 Glycine max
Glyma.17G047000 0.5kb downstream 0.5kb downstream 7461   true Chr17: 3523952-3531412 Glycine max
Glyma.17G047000 0.5kb downstream 0.5kb downstream 500   false Chr17: 3523952-3524451 Glycine max
Glyma.17G047000 1.0kb upstream 1.0kb upstream 7961   true Chr17: 3524452-3532412 Glycine max
Glyma.17G047000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 3531413-3532412 Glycine max
Glyma.17G047000 1.0kb downstream 1.0kb downstream 7961   true Chr17: 3523452-3531412 Glycine max
Glyma.17G047000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 3523452-3524451 Glycine max
Glyma.17G047000 2.0kb upstream 2.0kb upstream 8961   true Chr17: 3524452-3533412 Glycine max
Glyma.17G047000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 3531413-3533412 Glycine max
Glyma.17G047000 2.0kb downstream 2.0kb downstream 8961   true Chr17: 3522452-3531412 Glycine max
Glyma.17G047000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 3522452-3524451 Glycine max
Glyma.17G047000 5.0kb upstream 5.0kb upstream 11961   true Chr17: 3524452-3536412 Glycine max
Glyma.17G047000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 3531413-3536412 Glycine max
Glyma.17G047000 5.0kb downstream 5.0kb downstream 11961   true Chr17: 3519452-3531412 Glycine max
Glyma.17G047000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 3519452-3524451 Glycine max
Glyma.17G047000 10.0kb upstream 10.0kb upstream 16961   true Chr17: 3524452-3541412 Glycine max
Glyma.17G047000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 3531413-3541412 Glycine max
Glyma.17G047000 10.0kb downstream 10.0kb downstream 16961   true Chr17: 3514452-3531412 Glycine max
Glyma.17G047000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 3514452-3524451 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311031 5265 Fabidae View MSA
124071420 5270 Rosid View MSA
123738483 5271 Pentapetalae View MSA
122792751 5272 Eudicot View MSA
122051170 5273 Angiosperm View MSA
121345587 5274 Embryophyte View MSA
123424058 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.9365 0.0 142.416 High High
cufflinks 14.9462 0.0 51.2318    
cufflinks 11.0232 0.0 37.8341    
cufflinks 25.1544 0.0 90.2647 High  
cufflinks 14.9022 0.0 51.0336    
cufflinks 10.6713 0.0 37.0701    
cufflinks 42.509 0.0 198.692 High High
cufflinks 15.0731 0.0 52.0899    
cufflinks 9.07682 0.0 37.5277   Low
cufflinks 2.288        
cufflinks 0.521       Low
cufflinks 1.55        
cufflinks 1.873        
cufflinks 2.58        
cufflinks 0.328       Low
cufflinks 3.095        
cufflinks 1.171        
cufflinks 1.756        
cufflinks 2.541        
cufflinks 4.683       High
cufflinks 0.78        
cufflinks 4.202       High
cufflinks 2.94        
cufflinks 0.595       Low
cufflinks 4.434       High
cufflinks 0.878        

0 Strain