Gene : Glyma.17G047700 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR33077:SF13 - PROTEIN TIFY 10A-RELATED Genomic Order:  477
Name:  ? Glyma.17G047700 Secondary Identifier:  ? PAC:30479845
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G047700 0.5kb upstream 0.5kb upstream 2868   true Chr17: 3615654-3618521 Glycine max
Glyma.17G047700 0.5kb upstream 0.5kb upstream 500   false Chr17: 3618022-3618521 Glycine max
Glyma.17G047700 0.5kb downstream 0.5kb downstream 2868   true Chr17: 3615154-3618021 Glycine max
Glyma.17G047700 0.5kb downstream 0.5kb downstream 500   false Chr17: 3615154-3615653 Glycine max
Glyma.17G047700 1.0kb upstream 1.0kb upstream 3368   true Chr17: 3615654-3619021 Glycine max
Glyma.17G047700 1.0kb upstream 1.0kb upstream 1000   false Chr17: 3618022-3619021 Glycine max
Glyma.17G047700 1.0kb downstream 1.0kb downstream 3368   true Chr17: 3614654-3618021 Glycine max
Glyma.17G047700 1.0kb downstream 1.0kb downstream 1000   false Chr17: 3614654-3615653 Glycine max
Glyma.17G047700 2.0kb upstream 2.0kb upstream 4368   true Chr17: 3615654-3620021 Glycine max
Glyma.17G047700 2.0kb upstream 2.0kb upstream 2000   false Chr17: 3618022-3620021 Glycine max
Glyma.17G047700 2.0kb downstream 2.0kb downstream 4368   true Chr17: 3613654-3618021 Glycine max
Glyma.17G047700 2.0kb downstream 2.0kb downstream 2000   false Chr17: 3613654-3615653 Glycine max
Glyma.17G047700 5.0kb upstream 5.0kb upstream 7368   true Chr17: 3615654-3623021 Glycine max
Glyma.17G047700 5.0kb upstream 5.0kb upstream 5000   false Chr17: 3618022-3623021 Glycine max
Glyma.17G047700 5.0kb downstream 5.0kb downstream 7368   true Chr17: 3610654-3618021 Glycine max
Glyma.17G047700 5.0kb downstream 5.0kb downstream 5000   false Chr17: 3610654-3615653 Glycine max
Glyma.17G047700 10.0kb upstream 10.0kb upstream 12368   true Chr17: 3615654-3628021 Glycine max
Glyma.17G047700 10.0kb upstream 10.0kb upstream 10000   false Chr17: 3618022-3628021 Glycine max
Glyma.17G047700 10.0kb downstream 10.0kb downstream 12368   true Chr17: 3605654-3618021 Glycine max
Glyma.17G047700 10.0kb downstream 10.0kb downstream 10000   false Chr17: 3605654-3615653 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315145 5265 Fabidae View MSA
124071926 5270 Rosid View MSA
123747835 5271 Pentapetalae View MSA
122797679 5272 Eudicot View MSA
122046349 5273 Angiosperm View MSA
121349662 5274 Embryophyte View MSA
123381390 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.7935 0.0 46.3874   High
cufflinks 2.25314 0.0 12.7982    
cufflinks 1.52706 0.0 8.32135   Low
cufflinks 4.2187 0.0 18.0956    
cufflinks 3.34766 0.0 15.3068    
cufflinks 4.22399 0.0 17.8496    
cufflinks 18.8736 0.0 71.8676   High
cufflinks 2.0386 0.0 12.9331    
cufflinks 3.41725 0.0 19.1774    
cufflinks 19.711     High High
cufflinks 3.668        
cufflinks 3.512        
cufflinks 2.64        
cufflinks 0.585        
cufflinks 2.765        
cufflinks 0.289       Low
cufflinks 189.472     High High
cufflinks 3.144        
cufflinks 0.743        
cufflinks 0.121       Low
cufflinks 3.714        
cufflinks 0.123       Low
cufflinks 3.925        
cufflinks 1.489        
cufflinks 0.387        
cufflinks 17.427     High High

0 Strain