Gene : Glyma.17G048100 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR10338//PTHR10338:SF114 - VON WILLEBRAND FACTOR, TYPE A DOMAIN CONTAINING Genomic Order:  481
Name:  ? Glyma.17G048100 Secondary Identifier:  ? PAC:30479523
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G048100 0.5kb upstream 0.5kb upstream 6062   true Chr17: 3642102-3648163 Glycine max
Glyma.17G048100 0.5kb upstream 0.5kb upstream 500   false Chr17: 3647664-3648163 Glycine max
Glyma.17G048100 0.5kb downstream 0.5kb downstream 6062   true Chr17: 3641602-3647663 Glycine max
Glyma.17G048100 0.5kb downstream 0.5kb downstream 500   false Chr17: 3641602-3642101 Glycine max
Glyma.17G048100 1.0kb upstream 1.0kb upstream 6562   true Chr17: 3642102-3648663 Glycine max
Glyma.17G048100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 3647664-3648663 Glycine max
Glyma.17G048100 1.0kb downstream 1.0kb downstream 6562   true Chr17: 3641102-3647663 Glycine max
Glyma.17G048100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 3641102-3642101 Glycine max
Glyma.17G048100 2.0kb upstream 2.0kb upstream 7562   true Chr17: 3642102-3649663 Glycine max
Glyma.17G048100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 3647664-3649663 Glycine max
Glyma.17G048100 2.0kb downstream 2.0kb downstream 7562   true Chr17: 3640102-3647663 Glycine max
Glyma.17G048100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 3640102-3642101 Glycine max
Glyma.17G048100 5.0kb upstream 5.0kb upstream 10562   true Chr17: 3642102-3652663 Glycine max
Glyma.17G048100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 3647664-3652663 Glycine max
Glyma.17G048100 5.0kb downstream 5.0kb downstream 10562   true Chr17: 3637102-3647663 Glycine max
Glyma.17G048100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 3637102-3642101 Glycine max
Glyma.17G048100 10.0kb upstream 10.0kb upstream 15562   true Chr17: 3642102-3657663 Glycine max
Glyma.17G048100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 3647664-3657663 Glycine max
Glyma.17G048100 10.0kb downstream 10.0kb downstream 15562   true Chr17: 3632102-3647663 Glycine max
Glyma.17G048100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 3632102-3642101 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311131 5265 Fabidae View MSA
124062121 5270 Rosid View MSA
123749852 5271 Pentapetalae View MSA
122786287 5272 Eudicot View MSA
122047960 5273 Angiosperm View MSA
121346159 5274 Embryophyte View MSA
123426285 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.5496 0.0 42.7902   High
cufflinks 4.99295 0.0 16.267   Low
cufflinks 7.86778 0.0 27.5212    
cufflinks 5.5415 0.0 20.4589   Low
cufflinks 7.44043 0.0 26.1927    
cufflinks 15.3429 0.0 52.6736   High
cufflinks 8.58425 0.0 29.8566    
cufflinks 9.20396 0.0 31.7708    
cufflinks 6.77815 0.0 24.1761    
cufflinks 2.028        
cufflinks 4.729        
cufflinks 1.893        
cufflinks 2.137        
cufflinks 1.111       Low
cufflinks 3.488        
cufflinks 2.247        
cufflinks 9.784     High High
cufflinks 1.614        
cufflinks 1.298        
cufflinks 1.292        
cufflinks 4.951        
cufflinks 1.589        
cufflinks 0.741       Low
cufflinks 5.508       High
cufflinks 1.776        
cufflinks 10.517     High High

0 Strain