Gene : Glyma.17G048200 G. max Wm82.a2.v1
Defline:  (1 of 120) PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) Genomic Order:  482
Name:  ? Glyma.17G048200 Secondary Identifier:  ? PAC:30481332
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G048200 0.5kb upstream 0.5kb upstream 6319   true Chr17: 3649398-3655716 Glycine max
Glyma.17G048200 0.5kb upstream 0.5kb upstream 500   false Chr17: 3655217-3655716 Glycine max
Glyma.17G048200 0.5kb downstream 0.5kb downstream 6319   true Chr17: 3648898-3655216 Glycine max
Glyma.17G048200 0.5kb downstream 0.5kb downstream 500   false Chr17: 3648898-3649397 Glycine max
Glyma.17G048200 1.0kb upstream 1.0kb upstream 6819   true Chr17: 3649398-3656216 Glycine max
Glyma.17G048200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 3655217-3656216 Glycine max
Glyma.17G048200 1.0kb downstream 1.0kb downstream 6819   true Chr17: 3648398-3655216 Glycine max
Glyma.17G048200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 3648398-3649397 Glycine max
Glyma.17G048200 2.0kb upstream 2.0kb upstream 7819   true Chr17: 3649398-3657216 Glycine max
Glyma.17G048200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 3655217-3657216 Glycine max
Glyma.17G048200 2.0kb downstream 2.0kb downstream 7819   true Chr17: 3647398-3655216 Glycine max
Glyma.17G048200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 3647398-3649397 Glycine max
Glyma.17G048200 5.0kb upstream 5.0kb upstream 10819   true Chr17: 3649398-3660216 Glycine max
Glyma.17G048200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 3655217-3660216 Glycine max
Glyma.17G048200 5.0kb downstream 5.0kb downstream 10819   true Chr17: 3644398-3655216 Glycine max
Glyma.17G048200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 3644398-3649397 Glycine max
Glyma.17G048200 10.0kb upstream 10.0kb upstream 15819   true Chr17: 3649398-3665216 Glycine max
Glyma.17G048200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 3655217-3665216 Glycine max
Glyma.17G048200 10.0kb downstream 10.0kb downstream 15819   true Chr17: 3639398-3655216 Glycine max
Glyma.17G048200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 3639398-3649397 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314194 5265 Fabidae View MSA
124073256 5270 Rosid View MSA
123736665 5271 Pentapetalae View MSA
122795116 5272 Eudicot View MSA
122045954 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121351071 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.8607 0.0 5.65363   Low
cufflinks 2.91435 0.0 8.3528    
cufflinks 2.80126 0.0 8.03719    
cufflinks 4.43661 0.0 12.1789   High
cufflinks 3.72361 0.0 10.3953    
cufflinks 2.62437 0.0 7.61486    
cufflinks 3.92187 0.0 10.8981    
cufflinks 4.35528 0.0 11.9877   High
cufflinks 2.85238 0.0 8.19448    
cufflinks 2.288        
cufflinks 1.036       Low
cufflinks 2.355       High
cufflinks 1.787        
cufflinks 2.989       High
cufflinks 0.933       Low
cufflinks 1.584        
cufflinks 1.078        
cufflinks 3.065       High
cufflinks 2.162        
cufflinks 1.39        
cufflinks 0.831       Low
cufflinks 1.685        
cufflinks 1.627        
cufflinks 1.3        
cufflinks 1.36        
cufflinks 1.147        

0 Strain