Gene : Glyma.17G048600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR32378:SF9 - KERATIN-ASSOCIATED PROTEIN 29-1 Genomic Order:  486
Name:  ? Glyma.17G048600 Secondary Identifier:  ? PAC:30478550
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G048600 0.5kb upstream 0.5kb upstream 4011   true Chr17: 3687517-3691527 Glycine max
Glyma.17G048600 0.5kb upstream 0.5kb upstream 500   false Chr17: 3687517-3688016 Glycine max
Glyma.17G048600 0.5kb downstream 0.5kb downstream 4011   true Chr17: 3688017-3692027 Glycine max
Glyma.17G048600 0.5kb downstream 0.5kb downstream 500   false Chr17: 3691528-3692027 Glycine max
Glyma.17G048600 1.0kb upstream 1.0kb upstream 4511   true Chr17: 3687017-3691527 Glycine max
Glyma.17G048600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 3687017-3688016 Glycine max
Glyma.17G048600 1.0kb downstream 1.0kb downstream 4511   true Chr17: 3688017-3692527 Glycine max
Glyma.17G048600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 3691528-3692527 Glycine max
Glyma.17G048600 2.0kb upstream 2.0kb upstream 5511   true Chr17: 3686017-3691527 Glycine max
Glyma.17G048600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 3686017-3688016 Glycine max
Glyma.17G048600 2.0kb downstream 2.0kb downstream 5511   true Chr17: 3688017-3693527 Glycine max
Glyma.17G048600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 3691528-3693527 Glycine max
Glyma.17G048600 5.0kb upstream 5.0kb upstream 8511   true Chr17: 3683017-3691527 Glycine max
Glyma.17G048600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 3683017-3688016 Glycine max
Glyma.17G048600 5.0kb downstream 5.0kb downstream 8511   true Chr17: 3688017-3696527 Glycine max
Glyma.17G048600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 3691528-3696527 Glycine max
Glyma.17G048600 10.0kb upstream 10.0kb upstream 13511   true Chr17: 3678017-3691527 Glycine max
Glyma.17G048600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 3678017-3688016 Glycine max
Glyma.17G048600 10.0kb downstream 10.0kb downstream 13511   true Chr17: 3688017-3701527 Glycine max
Glyma.17G048600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 3691528-3701527 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026325 5273 Angiosperm View MSA
122300178 5265 Fabidae View MSA
124071651 5270 Rosid View MSA
123750452 5271 Pentapetalae View MSA
122787622 5272 Eudicot View MSA
121296281 5274 Embryophyte View MSA
123334475 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.030044 0.0 0.128032 Low Low
cufflinks 7.36078 0.0 20.8121   High
cufflinks 3.26326 0.0 10.2946    
cufflinks 1.29931 0.0 4.56277    
cufflinks 2.94817 0.0 9.40972    
cufflinks 0.999832 0.0 3.57948    
cufflinks 6.02556 0.0 17.4202    
cufflinks 0.432062 0.0 1.62122    
cufflinks 0.690893 0.0 2.53064    
cufflinks 0.18        
cufflinks 0.011     Low Low
cufflinks 0.661        
cufflinks 0.678        
cufflinks 1.435       High
cufflinks 0.01     Low Low
cufflinks 0.431        
cufflinks 0.014     Low Low
cufflinks 0.689        
cufflinks 1.822       High
cufflinks 0.224        
cufflinks 0.034     Low  
cufflinks 0.329        
cufflinks 0.607        
cufflinks 0.015     Low Low
cufflinks 0.452        
cufflinks 0.044     Low  

0 Strain