Gene : Glyma.17G049200 G. max Wm82.a2.v1
Genomic Order:  492 Name:  ? Glyma.17G049200
Secondary Identifier:  ? PAC:30480073
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G049200 0.5kb upstream 0.5kb upstream 3491   true Chr17: 3742730-3746220 Glycine max
Glyma.17G049200 0.5kb upstream 0.5kb upstream 500   false Chr17: 3742730-3743229 Glycine max
Glyma.17G049200 0.5kb downstream 0.5kb downstream 3491   true Chr17: 3743230-3746720 Glycine max
Glyma.17G049200 0.5kb downstream 0.5kb downstream 500   false Chr17: 3746221-3746720 Glycine max
Glyma.17G049200 1.0kb upstream 1.0kb upstream 3991   true Chr17: 3742230-3746220 Glycine max
Glyma.17G049200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 3742230-3743229 Glycine max
Glyma.17G049200 1.0kb downstream 1.0kb downstream 3991   true Chr17: 3743230-3747220 Glycine max
Glyma.17G049200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 3746221-3747220 Glycine max
Glyma.17G049200 2.0kb upstream 2.0kb upstream 4991   true Chr17: 3741230-3746220 Glycine max
Glyma.17G049200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 3741230-3743229 Glycine max
Glyma.17G049200 2.0kb downstream 2.0kb downstream 4991   true Chr17: 3743230-3748220 Glycine max
Glyma.17G049200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 3746221-3748220 Glycine max
Glyma.17G049200 5.0kb upstream 5.0kb upstream 7991   true Chr17: 3738230-3746220 Glycine max
Glyma.17G049200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 3738230-3743229 Glycine max
Glyma.17G049200 5.0kb downstream 5.0kb downstream 7991   true Chr17: 3743230-3751220 Glycine max
Glyma.17G049200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 3746221-3751220 Glycine max
Glyma.17G049200 10.0kb upstream 10.0kb upstream 12991   true Chr17: 3733230-3746220 Glycine max
Glyma.17G049200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 3733230-3743229 Glycine max
Glyma.17G049200 10.0kb downstream 10.0kb downstream 12991   true Chr17: 3743230-3756220 Glycine max
Glyma.17G049200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 3746221-3756220 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315263 5265 Fabidae View MSA
124073075 5270 Rosid View MSA
123744259 5271 Pentapetalae View MSA
122795127 5272 Eudicot View MSA
122049442 5273 Angiosperm View MSA
121350445 5274 Embryophyte View MSA
123381735 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.7506 0.0 45.5782   Low
cufflinks 26.7594 0.0 71.4688 High  
cufflinks 62.6183 0.0 171.492 High High
cufflinks 34.2109 0.0 91.3074 High  
cufflinks 34.3735 0.0 91.7605 High  
cufflinks 37.9344 0.0 101.41 High  
cufflinks 20.5419 0.0 55.3284    
cufflinks 22.3787 0.0 60.0058 High  
cufflinks 32.9485 0.0 87.9253 High  
cufflinks 10.694     High  
cufflinks 18.998     High  
cufflinks 15.171     High  
cufflinks 10.086     High  
cufflinks 5.961       Low
cufflinks 17.452     High  
cufflinks 13.268     High  
cufflinks 15.412     High  
cufflinks 10.675     High  
cufflinks 8.508     High Low
cufflinks 14.728     High  
cufflinks 19.752     High High
cufflinks 12.765     High  
cufflinks 12.186     High  
cufflinks 17.652     High  
cufflinks 14.379     High  
cufflinks 28.252     High High

0 Strain