Gene : Glyma.17G050600 G. max Wm82.a2.v1
Defline:  (1 of 18) PF07876 - Stress responsive A/B Barrel Domain (Dabb) Genomic Order:  506
Name:  ? Glyma.17G050600 Secondary Identifier:  ? PAC:30481553
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G050600 0.5kb upstream 0.5kb upstream 2587   true Chr17: 3845548-3848134 Glycine max
Glyma.17G050600 0.5kb upstream 0.5kb upstream 500   false Chr17: 3847635-3848134 Glycine max
Glyma.17G050600 0.5kb downstream 0.5kb downstream 2587   true Chr17: 3845048-3847634 Glycine max
Glyma.17G050600 0.5kb downstream 0.5kb downstream 500   false Chr17: 3845048-3845547 Glycine max
Glyma.17G050600 1.0kb upstream 1.0kb upstream 3087   true Chr17: 3845548-3848634 Glycine max
Glyma.17G050600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 3847635-3848634 Glycine max
Glyma.17G050600 1.0kb downstream 1.0kb downstream 3087   true Chr17: 3844548-3847634 Glycine max
Glyma.17G050600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 3844548-3845547 Glycine max
Glyma.17G050600 2.0kb upstream 2.0kb upstream 4087   true Chr17: 3845548-3849634 Glycine max
Glyma.17G050600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 3847635-3849634 Glycine max
Glyma.17G050600 2.0kb downstream 2.0kb downstream 4087   true Chr17: 3843548-3847634 Glycine max
Glyma.17G050600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 3843548-3845547 Glycine max
Glyma.17G050600 5.0kb upstream 5.0kb upstream 7087   true Chr17: 3845548-3852634 Glycine max
Glyma.17G050600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 3847635-3852634 Glycine max
Glyma.17G050600 5.0kb downstream 5.0kb downstream 7087   true Chr17: 3840548-3847634 Glycine max
Glyma.17G050600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 3840548-3845547 Glycine max
Glyma.17G050600 10.0kb upstream 10.0kb upstream 12087   true Chr17: 3845548-3857634 Glycine max
Glyma.17G050600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 3847635-3857634 Glycine max
Glyma.17G050600 10.0kb downstream 10.0kb downstream 12087   true Chr17: 3835548-3847634 Glycine max
Glyma.17G050600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 3835548-3845547 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302953 5265 Fabidae View MSA
124064751 5270 Rosid View MSA
123737427 5271 Pentapetalae View MSA
122789103 5272 Eudicot View MSA
122048000 5273 Angiosperm View MSA
121347460 5274 Embryophyte View MSA
123380557 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 61.3702 0.0 178.854 High  
cufflinks 38.978 0.0 107.735 High  
cufflinks 24.1729 0.0 64.8572 High Low
cufflinks 49.4924 0.0 140.045 High  
cufflinks 40.8199 0.0 113.647 High  
cufflinks 23.5725 0.0 63.2405 High Low
cufflinks 135.771 0.0 456.454 High High
cufflinks 38.3801 0.0 105.955 High  
cufflinks 32.7787 0.0 89.5188 High  
cufflinks 24.762     High  
cufflinks 3.25       Low
cufflinks 17.474     High  
cufflinks 16.151     High  
cufflinks 21.46     High  
cufflinks 6.525     High  
cufflinks 25.782     High  
cufflinks 5.182       Low
cufflinks 21.78     High  
cufflinks 30.867     High High
cufflinks 22.945     High  
cufflinks 5.006       Low
cufflinks 23.578     High  
cufflinks 31.124     High High
cufflinks 5.123       Low
cufflinks 23.365     High  
cufflinks 5.772       Low

0 Strain