Gene : Glyma.17G052200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13100:SF10 - CELL GROWTH-REGULATING NUCLEOLAR PROTEIN Genomic Order:  522
Name:  ? Glyma.17G052200 Secondary Identifier:  ? PAC:30480574
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G052200 0.5kb upstream 0.5kb upstream 7417   true Chr17: 3958929-3966345 Glycine max
Glyma.17G052200 0.5kb upstream 0.5kb upstream 500   false Chr17: 3958929-3959428 Glycine max
Glyma.17G052200 0.5kb downstream 0.5kb downstream 7417   true Chr17: 3959429-3966845 Glycine max
Glyma.17G052200 0.5kb downstream 0.5kb downstream 500   false Chr17: 3966346-3966845 Glycine max
Glyma.17G052200 1.0kb upstream 1.0kb upstream 7917   true Chr17: 3958429-3966345 Glycine max
Glyma.17G052200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 3958429-3959428 Glycine max
Glyma.17G052200 1.0kb downstream 1.0kb downstream 7917   true Chr17: 3959429-3967345 Glycine max
Glyma.17G052200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 3966346-3967345 Glycine max
Glyma.17G052200 2.0kb upstream 2.0kb upstream 8917   true Chr17: 3957429-3966345 Glycine max
Glyma.17G052200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 3957429-3959428 Glycine max
Glyma.17G052200 2.0kb downstream 2.0kb downstream 8917   true Chr17: 3959429-3968345 Glycine max
Glyma.17G052200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 3966346-3968345 Glycine max
Glyma.17G052200 5.0kb upstream 5.0kb upstream 11917   true Chr17: 3954429-3966345 Glycine max
Glyma.17G052200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 3954429-3959428 Glycine max
Glyma.17G052200 5.0kb downstream 5.0kb downstream 11917   true Chr17: 3959429-3971345 Glycine max
Glyma.17G052200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 3966346-3971345 Glycine max
Glyma.17G052200 10.0kb upstream 10.0kb upstream 16917   true Chr17: 3949429-3966345 Glycine max
Glyma.17G052200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 3949429-3959428 Glycine max
Glyma.17G052200 10.0kb downstream 10.0kb downstream 16917   true Chr17: 3959429-3976345 Glycine max
Glyma.17G052200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 3966346-3976345 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306103 5265 Fabidae View MSA
124066712 5270 Rosid View MSA
123737699 5271 Pentapetalae View MSA
122788862 5272 Eudicot View MSA
122047335 5273 Angiosperm View MSA
121345272 5274 Embryophyte View MSA
123427954 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4595 0.0 30.9898    
cufflinks 9.25086 0.0 25.3331    
cufflinks 4.14019 0.0 12.3582   Low
cufflinks 5.37436 0.0 15.5003   Low
cufflinks 11.9906 0.0 32.3506   High
cufflinks 9.5865 0.0 26.1986    
cufflinks 5.72516 0.0 16.4554    
cufflinks 7.77407 0.0 21.5573    
cufflinks 10.7729 0.0 29.2171    
cufflinks 1.828        
cufflinks 0.711       Low
cufflinks 1.836        
cufflinks 4.316       High
cufflinks 6.229       High
cufflinks 1.053        
cufflinks 1.767        
cufflinks 1.33        
cufflinks 1.939        
cufflinks 2.022        
cufflinks 1.363        
cufflinks 1.263        
cufflinks 1.549        
cufflinks 1.907        
cufflinks 0.956       Low
cufflinks 1.698        
cufflinks 1.502        

0 Strain