Gene : Glyma.17G041100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12103:SF15 - PROTEIN Y71H10B.1, ISOFORM C Genomic Order:  411
Name:  ? Glyma.17G041100 Secondary Identifier:  ? PAC:30480233
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5381 Glycine max pathologic  
Gmax PWY-5695 Glycine max pathologic  
Gmax PWY-6596 Glycine max pathologic  
Gmax PWY-6606 Glycine max pathologic  
Gmax PWY-6608 Glycine max pathologic  
Gmax PWY-7185 Glycine max pathologic  
Gmax SALVADEHYPOX-PWY Glycine max pathologic  
Gmax URSIN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G041100 0.5kb upstream 0.5kb upstream 7480   true Chr17: 3028733-3036212 Glycine max
Glyma.17G041100 0.5kb upstream 0.5kb upstream 500   false Chr17: 3035713-3036212 Glycine max
Glyma.17G041100 0.5kb downstream 0.5kb downstream 7480   true Chr17: 3028233-3035712 Glycine max
Glyma.17G041100 0.5kb downstream 0.5kb downstream 500   false Chr17: 3028233-3028732 Glycine max
Glyma.17G041100 1.0kb upstream 1.0kb upstream 7980   true Chr17: 3028733-3036712 Glycine max
Glyma.17G041100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 3035713-3036712 Glycine max
Glyma.17G041100 1.0kb downstream 1.0kb downstream 7980   true Chr17: 3027733-3035712 Glycine max
Glyma.17G041100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 3027733-3028732 Glycine max
Glyma.17G041100 2.0kb upstream 2.0kb upstream 8980   true Chr17: 3028733-3037712 Glycine max
Glyma.17G041100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 3035713-3037712 Glycine max
Glyma.17G041100 2.0kb downstream 2.0kb downstream 8980   true Chr17: 3026733-3035712 Glycine max
Glyma.17G041100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 3026733-3028732 Glycine max
Glyma.17G041100 5.0kb upstream 5.0kb upstream 11980   true Chr17: 3028733-3040712 Glycine max
Glyma.17G041100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 3035713-3040712 Glycine max
Glyma.17G041100 5.0kb downstream 5.0kb downstream 11980   true Chr17: 3023733-3035712 Glycine max
Glyma.17G041100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 3023733-3028732 Glycine max
Glyma.17G041100 10.0kb upstream 10.0kb upstream 16980   true Chr17: 3028733-3045712 Glycine max
Glyma.17G041100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 3035713-3045712 Glycine max
Glyma.17G041100 10.0kb downstream 10.0kb downstream 16980   true Chr17: 3018733-3035712 Glycine max
Glyma.17G041100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 3018733-3028732 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301558 5265 Fabidae View MSA
124068211 5270 Rosid View MSA
123737665 5271 Pentapetalae View MSA
122791643 5272 Eudicot View MSA
122047962 5273 Angiosperm View MSA
121348672 5274 Embryophyte View MSA
123428872 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.80052 0.0 15.2346    
cufflinks 8.89498 0.0 32.9806   High
cufflinks 4.4981 0.0 17.025    
cufflinks 7.10949 0.0 26.521    
cufflinks 10.458 0.0 36.8645   High
cufflinks 3.73127 0.0 12.5437   Low
cufflinks 8.13848 0.0 30.0156    
cufflinks 4.66736 0.0 16.0116    
cufflinks 4.76888 0.0 19.0884    
cufflinks 1.05        
cufflinks 0.272       Low
cufflinks 1.168        
cufflinks 1.525        
cufflinks 2.305       High
cufflinks 0.115       Low
cufflinks 0.853        
cufflinks 0.801        
cufflinks 1.41        
cufflinks 2.022       High
cufflinks 1.046        
cufflinks 0.259       Low
cufflinks 0.975        
cufflinks 1.223        
cufflinks 0.189       Low
cufflinks 0.942        
cufflinks 0.706        

0 Strain