Gene : Glyma.17G041500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31342:SF12 - F11A17.16 Genomic Order:  415
Name:  ? Glyma.17G041500 Secondary Identifier:  ? PAC:30480143
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G041500 0.5kb upstream 0.5kb upstream 5234   true Chr17: 3089737-3094970 Glycine max
Glyma.17G041500 0.5kb upstream 0.5kb upstream 500   false Chr17: 3089737-3090236 Glycine max
Glyma.17G041500 0.5kb downstream 0.5kb downstream 5234   true Chr17: 3090237-3095470 Glycine max
Glyma.17G041500 0.5kb downstream 0.5kb downstream 500   false Chr17: 3094971-3095470 Glycine max
Glyma.17G041500 1.0kb upstream 1.0kb upstream 5734   true Chr17: 3089237-3094970 Glycine max
Glyma.17G041500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 3089237-3090236 Glycine max
Glyma.17G041500 1.0kb downstream 1.0kb downstream 5734   true Chr17: 3090237-3095970 Glycine max
Glyma.17G041500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 3094971-3095970 Glycine max
Glyma.17G041500 2.0kb upstream 2.0kb upstream 6734   true Chr17: 3088237-3094970 Glycine max
Glyma.17G041500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 3088237-3090236 Glycine max
Glyma.17G041500 2.0kb downstream 2.0kb downstream 6734   true Chr17: 3090237-3096970 Glycine max
Glyma.17G041500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 3094971-3096970 Glycine max
Glyma.17G041500 5.0kb upstream 5.0kb upstream 9734   true Chr17: 3085237-3094970 Glycine max
Glyma.17G041500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 3085237-3090236 Glycine max
Glyma.17G041500 5.0kb downstream 5.0kb downstream 9734   true Chr17: 3090237-3099970 Glycine max
Glyma.17G041500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 3094971-3099970 Glycine max
Glyma.17G041500 10.0kb upstream 10.0kb upstream 14734   true Chr17: 3080237-3094970 Glycine max
Glyma.17G041500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 3080237-3090236 Glycine max
Glyma.17G041500 10.0kb downstream 10.0kb downstream 14734   true Chr17: 3090237-3104970 Glycine max
Glyma.17G041500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 3094971-3104970 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310858 5265 Fabidae View MSA
124068159 5270 Rosid View MSA
123646677 5271 Pentapetalae View MSA
122790605 5272 Eudicot View MSA
122043379 5273 Angiosperm View MSA
121310114 5274 Embryophyte View MSA
123427495 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.36128 0.0 14.8876    
cufflinks 3.29279 0.0 13.9083    
cufflinks 8.89955 0.0 31.9143   High
cufflinks 2.54304 0.0 11.6075    
cufflinks 5.0873 0.0 16.8259    
cufflinks 2.83376 0.0 14.169    
cufflinks 7.40477 0.0 27.3963    
cufflinks 0.724404 0.0 5.00323   Low
cufflinks 4.92164 0.0 16.8611    
cufflinks 0.145       Low
cufflinks 0.705        
cufflinks 1.412       High
cufflinks 0.823        
cufflinks 1.074        
cufflinks 1.821       High
cufflinks 0.594        
cufflinks 0.298       Low
cufflinks 1.131        
cufflinks 0.43        
cufflinks 1.747       High
cufflinks 0.582        
cufflinks 1.125        
cufflinks 0.581        
cufflinks 0.391        
cufflinks 1.019        
cufflinks 0.482        

0 Strain