Gene : Glyma.17G045300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15629:SF2 - SH3 DOMAIN-CONTAINING YSC84-LIKE PROTEIN 1 Genomic Order:  453
Name:  ? Glyma.17G045300 Secondary Identifier:  ? PAC:30481662
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G045300 0.5kb upstream 0.5kb upstream 4063   true Chr17: 3357451-3361513 Glycine max
Glyma.17G045300 0.5kb upstream 0.5kb upstream 500   false Chr17: 3361014-3361513 Glycine max
Glyma.17G045300 0.5kb downstream 0.5kb downstream 4063   true Chr17: 3356951-3361013 Glycine max
Glyma.17G045300 0.5kb downstream 0.5kb downstream 500   false Chr17: 3356951-3357450 Glycine max
Glyma.17G045300 1.0kb upstream 1.0kb upstream 4563   true Chr17: 3357451-3362013 Glycine max
Glyma.17G045300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 3361014-3362013 Glycine max
Glyma.17G045300 1.0kb downstream 1.0kb downstream 4563   true Chr17: 3356451-3361013 Glycine max
Glyma.17G045300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 3356451-3357450 Glycine max
Glyma.17G045300 2.0kb upstream 2.0kb upstream 5563   true Chr17: 3357451-3363013 Glycine max
Glyma.17G045300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 3361014-3363013 Glycine max
Glyma.17G045300 2.0kb downstream 2.0kb downstream 5563   true Chr17: 3355451-3361013 Glycine max
Glyma.17G045300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 3355451-3357450 Glycine max
Glyma.17G045300 5.0kb upstream 5.0kb upstream 8563   true Chr17: 3357451-3366013 Glycine max
Glyma.17G045300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 3361014-3366013 Glycine max
Glyma.17G045300 5.0kb downstream 5.0kb downstream 8563   true Chr17: 3352451-3361013 Glycine max
Glyma.17G045300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 3352451-3357450 Glycine max
Glyma.17G045300 10.0kb upstream 10.0kb upstream 13563   true Chr17: 3357451-3371013 Glycine max
Glyma.17G045300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 3361014-3371013 Glycine max
Glyma.17G045300 10.0kb downstream 10.0kb downstream 13563   true Chr17: 3347451-3361013 Glycine max
Glyma.17G045300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 3347451-3357450 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311551 5265 Fabidae View MSA
124061750 5270 Rosid View MSA
123737814 5271 Pentapetalae View MSA
122792588 5272 Eudicot View MSA
122046278 5273 Angiosperm View MSA
121345874 5274 Embryophyte View MSA
123426176 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3597 0.0 45.9449    
cufflinks 8.44542 0.0 35.4286   Low
cufflinks 39.0981 0.0 202.546 High High
cufflinks 13.474 0.0 55.9446    
cufflinks 9.46842 0.0 41.4753    
cufflinks 22.5143 0.0 108.269   High
cufflinks 13.3523 0.0 60.2657    
cufflinks 13.5646 0.0 53.8019    
cufflinks 9.20892 0.0 38.0568    
cufflinks 1.588        
cufflinks 4.151       High
cufflinks 3.973       High
cufflinks 1.943        
cufflinks 1.321       Low
cufflinks 1.705        
cufflinks 1.548        
cufflinks 2.797        
cufflinks 2.391        
cufflinks 1.632        
cufflinks 1.631        
cufflinks 3.152        
cufflinks 1.681        
cufflinks 1.314       Low
cufflinks 4.484       High
cufflinks 1.572        
cufflinks 3.622       High

0 Strain