Gene : Glyma.17G037200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12595:SF6 - TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 9 Genomic Order:  372
Name:  ? Glyma.17G037200 Secondary Identifier:  ? PAC:30479145
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G037200 0.5kb upstream 0.5kb upstream 3927   true Chr17: 2708679-2712605 Glycine max
Glyma.17G037200 0.5kb upstream 0.5kb upstream 500   false Chr17: 2708679-2709178 Glycine max
Glyma.17G037200 0.5kb downstream 0.5kb downstream 3927   true Chr17: 2709179-2713105 Glycine max
Glyma.17G037200 0.5kb downstream 0.5kb downstream 500   false Chr17: 2712606-2713105 Glycine max
Glyma.17G037200 1.0kb upstream 1.0kb upstream 4427   true Chr17: 2708179-2712605 Glycine max
Glyma.17G037200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2708179-2709178 Glycine max
Glyma.17G037200 1.0kb downstream 1.0kb downstream 4427   true Chr17: 2709179-2713605 Glycine max
Glyma.17G037200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2712606-2713605 Glycine max
Glyma.17G037200 2.0kb upstream 2.0kb upstream 5427   true Chr17: 2707179-2712605 Glycine max
Glyma.17G037200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2707179-2709178 Glycine max
Glyma.17G037200 2.0kb downstream 2.0kb downstream 5427   true Chr17: 2709179-2714605 Glycine max
Glyma.17G037200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2712606-2714605 Glycine max
Glyma.17G037200 5.0kb upstream 5.0kb upstream 8427   true Chr17: 2704179-2712605 Glycine max
Glyma.17G037200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2704179-2709178 Glycine max
Glyma.17G037200 5.0kb downstream 5.0kb downstream 8427   true Chr17: 2709179-2717605 Glycine max
Glyma.17G037200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2712606-2717605 Glycine max
Glyma.17G037200 10.0kb upstream 10.0kb upstream 13427   true Chr17: 2699179-2712605 Glycine max
Glyma.17G037200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2699179-2709178 Glycine max
Glyma.17G037200 10.0kb downstream 10.0kb downstream 13427   true Chr17: 2709179-2722605 Glycine max
Glyma.17G037200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2712606-2722605 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306304 5265 Fabidae View MSA
124067490 5270 Rosid View MSA
123736681 5271 Pentapetalae View MSA
122786173 5272 Eudicot View MSA
122043931 5273 Angiosperm View MSA
121344953 5274 Embryophyte View MSA
123428826 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.95412 0.0 18.5444    
cufflinks 7.75808 0.0 23.2845   High
cufflinks 3.50016 0.0 11.739   Low
cufflinks 4.58759 0.0 14.8175    
cufflinks 7.23845 0.0 21.8156    
cufflinks 5.39528 0.0 17.0083    
cufflinks 8.20991 0.0 24.4218   High
cufflinks 3.62304 0.0 12.0587   Low
cufflinks 6.5832 0.0 20.1506    
cufflinks 0.784        
cufflinks 0.543       Low
cufflinks 0.982        
cufflinks 1.595        
cufflinks 1.685        
cufflinks 0.572       Low
cufflinks 1.984       High
cufflinks 0.466       Low
cufflinks 1.097        
cufflinks 1.628        
cufflinks 2.284       High
cufflinks 0.584       Low
cufflinks 2.078       High
cufflinks 2.072       High
cufflinks 0.777        
cufflinks 1.96       High
cufflinks 0.699        

0 Strain