Gene : Glyma.17G037700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10724 - S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  377
Name:  ? Glyma.17G037700 Secondary Identifier:  ? PAC:30479669
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G037700 0.5kb upstream 0.5kb upstream 4124   true Chr17: 2793193-2797316 Glycine max
Glyma.17G037700 0.5kb upstream 0.5kb upstream 500   false Chr17: 2796817-2797316 Glycine max
Glyma.17G037700 0.5kb downstream 0.5kb downstream 4124   true Chr17: 2792693-2796816 Glycine max
Glyma.17G037700 0.5kb downstream 0.5kb downstream 500   false Chr17: 2792693-2793192 Glycine max
Glyma.17G037700 1.0kb upstream 1.0kb upstream 4624   true Chr17: 2793193-2797816 Glycine max
Glyma.17G037700 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2796817-2797816 Glycine max
Glyma.17G037700 1.0kb downstream 1.0kb downstream 4624   true Chr17: 2792193-2796816 Glycine max
Glyma.17G037700 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2792193-2793192 Glycine max
Glyma.17G037700 2.0kb upstream 2.0kb upstream 5624   true Chr17: 2793193-2798816 Glycine max
Glyma.17G037700 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2796817-2798816 Glycine max
Glyma.17G037700 2.0kb downstream 2.0kb downstream 5624   true Chr17: 2791193-2796816 Glycine max
Glyma.17G037700 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2791193-2793192 Glycine max
Glyma.17G037700 5.0kb upstream 5.0kb upstream 8624   true Chr17: 2793193-2801816 Glycine max
Glyma.17G037700 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2796817-2801816 Glycine max
Glyma.17G037700 5.0kb downstream 5.0kb downstream 8624   true Chr17: 2788193-2796816 Glycine max
Glyma.17G037700 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2788193-2793192 Glycine max
Glyma.17G037700 10.0kb upstream 10.0kb upstream 13624   true Chr17: 2793193-2806816 Glycine max
Glyma.17G037700 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2796817-2806816 Glycine max
Glyma.17G037700 10.0kb downstream 10.0kb downstream 13624   true Chr17: 2783193-2796816 Glycine max
Glyma.17G037700 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2783193-2793192 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311491 5265 Fabidae View MSA
124061021 5270 Rosid View MSA
123748044 5271 Pentapetalae View MSA
122788997 5272 Eudicot View MSA
122042339 5273 Angiosperm View MSA
121347373 5274 Embryophyte View MSA
123425881 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 86.0026 0.0 262.329 High High
cufflinks 56.1644 0.0 161.38 High High
cufflinks 12.2138 0.0 32.7699    
cufflinks 20.451 0.0 54.6339 High  
cufflinks 9.57348 0.0 26.0074    
cufflinks 7.6646 0.0 21.1623    
cufflinks 9.565 0.0 26.0009    
cufflinks 12.7643 0.0 34.1992    
cufflinks 4.24338 0.0 12.4741   Low
cufflinks 18.407     High  
cufflinks 1.402        
cufflinks 9.971     High  
cufflinks 1.175       Low
cufflinks 1.087       Low
cufflinks 1.584        
cufflinks 121.529     High High
cufflinks 0.932       Low
cufflinks 15.359     High  
cufflinks 23.635     High  
cufflinks 146.369     High High
cufflinks 1.914        
cufflinks 118.715     High High
cufflinks 83.603     High High
cufflinks 1.578        
cufflinks 129.135     High High
cufflinks 1.218        

0 Strain