Gene : Glyma.17G038300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23068//PTHR23068:SF11 - DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED Genomic Order:  383
Name:  ? Glyma.17G038300 Secondary Identifier:  ? PAC:30479077
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G038300 0.5kb upstream 0.5kb upstream 11934   true Chr17: 2822685-2834618 Glycine max
Glyma.17G038300 0.5kb upstream 0.5kb upstream 500   false Chr17: 2834119-2834618 Glycine max
Glyma.17G038300 0.5kb downstream 0.5kb downstream 11934   true Chr17: 2822185-2834118 Glycine max
Glyma.17G038300 0.5kb downstream 0.5kb downstream 500   false Chr17: 2822185-2822684 Glycine max
Glyma.17G038300 1.0kb upstream 1.0kb upstream 12434   true Chr17: 2822685-2835118 Glycine max
Glyma.17G038300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2834119-2835118 Glycine max
Glyma.17G038300 1.0kb downstream 1.0kb downstream 12434   true Chr17: 2821685-2834118 Glycine max
Glyma.17G038300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2821685-2822684 Glycine max
Glyma.17G038300 2.0kb upstream 2.0kb upstream 13434   true Chr17: 2822685-2836118 Glycine max
Glyma.17G038300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2834119-2836118 Glycine max
Glyma.17G038300 2.0kb downstream 2.0kb downstream 13434   true Chr17: 2820685-2834118 Glycine max
Glyma.17G038300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2820685-2822684 Glycine max
Glyma.17G038300 5.0kb upstream 5.0kb upstream 16434   true Chr17: 2822685-2839118 Glycine max
Glyma.17G038300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2834119-2839118 Glycine max
Glyma.17G038300 5.0kb downstream 5.0kb downstream 16434   true Chr17: 2817685-2834118 Glycine max
Glyma.17G038300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2817685-2822684 Glycine max
Glyma.17G038300 10.0kb upstream 10.0kb upstream 21434   true Chr17: 2822685-2844118 Glycine max
Glyma.17G038300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2834119-2844118 Glycine max
Glyma.17G038300 10.0kb downstream 10.0kb downstream 21434   true Chr17: 2812685-2834118 Glycine max
Glyma.17G038300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2812685-2822684 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304849 5265 Fabidae View MSA
124066884 5270 Rosid View MSA
123739152 5271 Pentapetalae View MSA
122785997 5272 Eudicot View MSA
122049231 5273 Angiosperm View MSA
121350699 5274 Embryophyte View MSA
123381851 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.38862 0.0 4.54835   Low
cufflinks 5.82569 0.0 15.9621    
cufflinks 2.76924 0.0 8.18684    
cufflinks 4.61332 0.0 12.8806    
cufflinks 3.11057 0.0 9.1207    
cufflinks 3.8984 0.0 11.0907    
cufflinks 9.50668 0.0 25.4503   High
cufflinks 2.72114 0.0 8.09638    
cufflinks 5.43976 0.0 14.9861    
cufflinks 0.498        
cufflinks 0.724        
cufflinks 1.146        
cufflinks 0.683        
cufflinks 0.622        
cufflinks 3.247       High
cufflinks 1.086        
cufflinks 0.48       Low
cufflinks 1.395        
cufflinks 1.661       High
cufflinks 1.23        
cufflinks 0.451       Low
cufflinks 1.097        
cufflinks 1.044        
cufflinks 0.415       Low
cufflinks 1.254        
cufflinks 0.432       Low

0 Strain