Gene : Glyma.17G039000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11964:SF16 - S-ADENOSYLMETHIONINE SYNTHASE 4 Genomic Order:  390
Name:  ? Glyma.17G039000 Secondary Identifier:  ? PAC:30478956
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ETHYL-PWY Glycine max pathologic  
Gmax PWY-5041 Glycine max pathologic  
Gmax PWY-7270 Glycine max pathologic  
Gmax PWY-7528 Glycine max pathologic  
Gmax SAM-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G039000 0.5kb upstream 0.5kb upstream 2771   true Chr17: 2891177-2893947 Glycine max
Glyma.17G039000 0.5kb upstream 0.5kb upstream 500   false Chr17: 2891177-2891676 Glycine max
Glyma.17G039000 0.5kb downstream 0.5kb downstream 2771   true Chr17: 2891677-2894447 Glycine max
Glyma.17G039000 0.5kb downstream 0.5kb downstream 500   false Chr17: 2893948-2894447 Glycine max
Glyma.17G039000 1.0kb upstream 1.0kb upstream 3271   true Chr17: 2890677-2893947 Glycine max
Glyma.17G039000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2890677-2891676 Glycine max
Glyma.17G039000 1.0kb downstream 1.0kb downstream 3271   true Chr17: 2891677-2894947 Glycine max
Glyma.17G039000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2893948-2894947 Glycine max
Glyma.17G039000 2.0kb upstream 2.0kb upstream 4271   true Chr17: 2889677-2893947 Glycine max
Glyma.17G039000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2889677-2891676 Glycine max
Glyma.17G039000 2.0kb downstream 2.0kb downstream 4271   true Chr17: 2891677-2895947 Glycine max
Glyma.17G039000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2893948-2895947 Glycine max
Glyma.17G039000 5.0kb upstream 5.0kb upstream 7271   true Chr17: 2886677-2893947 Glycine max
Glyma.17G039000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2886677-2891676 Glycine max
Glyma.17G039000 5.0kb downstream 5.0kb downstream 7271   true Chr17: 2891677-2898947 Glycine max
Glyma.17G039000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2893948-2898947 Glycine max
Glyma.17G039000 10.0kb upstream 10.0kb upstream 12271   true Chr17: 2881677-2893947 Glycine max
Glyma.17G039000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2881677-2891676 Glycine max
Glyma.17G039000 10.0kb downstream 10.0kb downstream 12271   true Chr17: 2891677-2903947 Glycine max
Glyma.17G039000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2893948-2903947 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312282 5265 Fabidae View MSA
124071804 5270 Rosid View MSA
123752865 5271 Pentapetalae View MSA
122794208 5272 Eudicot View MSA
122047125 5273 Angiosperm View MSA
121349455 5274 Embryophyte View MSA
123428115 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.7977 0.0 91.8639 High  
cufflinks 67.3523 0.0 196.022 High  
cufflinks 46.2191 0.0 128.578 High  
cufflinks 72.8556 0.0 214.789 High High
cufflinks 25.0571 0.0 67.2018 High  
cufflinks 24.8287 0.0 66.5269 High  
cufflinks 25.7229 0.0 69.0288 High  
cufflinks 111.019 0.0 352.83 High High
cufflinks 21.7046 0.0 57.9811 High Low
cufflinks 35.352     High  
cufflinks 4.89       Low
cufflinks 22.107     High  
cufflinks 15.961     High  
cufflinks 7.08     High  
cufflinks 1.255       Low
cufflinks 40.983     High  
cufflinks 100.893     High High
cufflinks 10.6     High  
cufflinks 64.305     High High
cufflinks 17.135     High  
cufflinks 4.24       Low
cufflinks 25.078     High  
cufflinks 31.044     High  
cufflinks 6.378     High  
cufflinks 27.943     High  
cufflinks 11.913     High  

0 Strain