Gene : Glyma.17G077500 G. max Wm82.a2.v1
Defline:  (1 of 1) PF00004//PF02861 - ATPase family associated with various cellular activities (AAA) (AAA) // Clp amino terminal domain, pathogenicity island component (Clp_N) Genomic Order:  775
Name:  ? Glyma.17G077500 Secondary Identifier:  ? PAC:30481627
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G077500 0.5kb upstream 0.5kb upstream 2459   true Chr17: 6061126-6063584 Glycine max
Glyma.17G077500 0.5kb upstream 0.5kb upstream 500   false Chr17: 6061126-6061625 Glycine max
Glyma.17G077500 0.5kb downstream 0.5kb downstream 2459   true Chr17: 6061626-6064084 Glycine max
Glyma.17G077500 0.5kb downstream 0.5kb downstream 500   false Chr17: 6063585-6064084 Glycine max
Glyma.17G077500 1.0kb upstream 1.0kb upstream 2959   true Chr17: 6060626-6063584 Glycine max
Glyma.17G077500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 6060626-6061625 Glycine max
Glyma.17G077500 1.0kb downstream 1.0kb downstream 2959   true Chr17: 6061626-6064584 Glycine max
Glyma.17G077500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 6063585-6064584 Glycine max
Glyma.17G077500 2.0kb upstream 2.0kb upstream 3959   true Chr17: 6059626-6063584 Glycine max
Glyma.17G077500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 6059626-6061625 Glycine max
Glyma.17G077500 2.0kb downstream 2.0kb downstream 3959   true Chr17: 6061626-6065584 Glycine max
Glyma.17G077500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 6063585-6065584 Glycine max
Glyma.17G077500 5.0kb upstream 5.0kb upstream 6959   true Chr17: 6056626-6063584 Glycine max
Glyma.17G077500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 6056626-6061625 Glycine max
Glyma.17G077500 5.0kb downstream 5.0kb downstream 6959   true Chr17: 6061626-6068584 Glycine max
Glyma.17G077500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 6063585-6068584 Glycine max
Glyma.17G077500 10.0kb upstream 10.0kb upstream 11959   true Chr17: 6051626-6063584 Glycine max
Glyma.17G077500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 6051626-6061625 Glycine max
Glyma.17G077500 10.0kb downstream 10.0kb downstream 11959   true Chr17: 6061626-6073584 Glycine max
Glyma.17G077500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 6063585-6073584 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312531 5265 Fabidae View MSA
124050481 5270 Rosid View MSA
123745437 5271 Pentapetalae View MSA
122797110 5272 Eudicot View MSA
122050456 5273 Angiosperm View MSA
121347252 5274 Embryophyte View MSA
123425862 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0249967 0.0 0.106769 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.128963 0.0 0.506209 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.114917 0.0 0.452785 Low  
cufflinks 0.031545 0.0 0.131719 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.56       High
cufflinks 0.017     Low  
cufflinks 0.033     Low  
cufflinks 0.019     Low  
cufflinks 0.533       High
cufflinks 0.01     Low Low
cufflinks 0.04     Low  
cufflinks 0.05     Low  
cufflinks 0.026     Low  
cufflinks 0.018     Low  
cufflinks 0.091        
cufflinks 0.027     Low  
cufflinks 0.027     Low  
cufflinks 0.06        
cufflinks 0.047     Low  
cufflinks 0.032     Low  

0 Strain