Gene : Glyma.17G080100 G. max Wm82.a2.v1
Defline:  (1 of 6) PF13415//PF13418 - Galactose oxidase, central domain (Kelch_3) // Galactose oxidase, central domain (Kelch_4) Genomic Order:  801
Name:  ? Glyma.17G080100 Secondary Identifier:  ? PAC:30482157
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G080100 0.5kb upstream 0.5kb upstream 8116   true Chr17: 6204710-6212825 Glycine max
Glyma.17G080100 0.5kb upstream 0.5kb upstream 500   false Chr17: 6212326-6212825 Glycine max
Glyma.17G080100 0.5kb downstream 0.5kb downstream 8116   true Chr17: 6204210-6212325 Glycine max
Glyma.17G080100 0.5kb downstream 0.5kb downstream 500   false Chr17: 6204210-6204709 Glycine max
Glyma.17G080100 1.0kb upstream 1.0kb upstream 8616   true Chr17: 6204710-6213325 Glycine max
Glyma.17G080100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 6212326-6213325 Glycine max
Glyma.17G080100 1.0kb downstream 1.0kb downstream 8616   true Chr17: 6203710-6212325 Glycine max
Glyma.17G080100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 6203710-6204709 Glycine max
Glyma.17G080100 2.0kb upstream 2.0kb upstream 9616   true Chr17: 6204710-6214325 Glycine max
Glyma.17G080100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 6212326-6214325 Glycine max
Glyma.17G080100 2.0kb downstream 2.0kb downstream 9616   true Chr17: 6202710-6212325 Glycine max
Glyma.17G080100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 6202710-6204709 Glycine max
Glyma.17G080100 5.0kb upstream 5.0kb upstream 12616   true Chr17: 6204710-6217325 Glycine max
Glyma.17G080100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 6212326-6217325 Glycine max
Glyma.17G080100 5.0kb downstream 5.0kb downstream 12616   true Chr17: 6199710-6212325 Glycine max
Glyma.17G080100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 6199710-6204709 Glycine max
Glyma.17G080100 10.0kb upstream 10.0kb upstream 17616   true Chr17: 6204710-6222325 Glycine max
Glyma.17G080100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 6212326-6222325 Glycine max
Glyma.17G080100 10.0kb downstream 10.0kb downstream 17616   true Chr17: 6194710-6212325 Glycine max
Glyma.17G080100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 6194710-6204709 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307789 5265 Fabidae View MSA
124062622 5270 Rosid View MSA
123743479 5271 Pentapetalae View MSA
122792460 5272 Eudicot View MSA
122048338 5273 Angiosperm View MSA
121348105 5274 Embryophyte View MSA
123428379 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.47866 0.0 16.7867    
cufflinks 4.70494 0.0 18.2829    
cufflinks 3.32601 0.0 12.0111    
cufflinks 3.31516 0.0 12.0063    
cufflinks 2.77046 0.0 10.6792    
cufflinks 1.78079 0.0 7.86164   Low
cufflinks 4.04855 0.0 16.2384    
cufflinks 2.41133 0.0 9.64299    
cufflinks 5.90004 0.0 18.7251   High
cufflinks 0.207       Low
cufflinks 0.298        
cufflinks 0.431        
cufflinks 0.324        
cufflinks 0.26        
cufflinks 0.479        
cufflinks 0.402        
cufflinks 0.161       Low
cufflinks 0.448        
cufflinks 0.467        
cufflinks 0.503       High
cufflinks 0.302        
cufflinks 0.483        
cufflinks 0.541       High
cufflinks 0.292        
cufflinks 0.427        
cufflinks 0.207       Low

0 Strain