Gene : Glyma.17G080200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33370:SF1 - TRANSLATION INITIATION FACTOR IF-1, CHLOROPLASTIC Genomic Order:  802
Name:  ? Glyma.17G080200 Secondary Identifier:  ? PAC:30482462
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G080200 0.5kb upstream 0.5kb upstream 1545   true Chr17: 6216557-6218101 Glycine max
Glyma.17G080200 0.5kb upstream 0.5kb upstream 500   false Chr17: 6217602-6218101 Glycine max
Glyma.17G080200 0.5kb downstream 0.5kb downstream 1545   true Chr17: 6216057-6217601 Glycine max
Glyma.17G080200 0.5kb downstream 0.5kb downstream 500   false Chr17: 6216057-6216556 Glycine max
Glyma.17G080200 1.0kb upstream 1.0kb upstream 2045   true Chr17: 6216557-6218601 Glycine max
Glyma.17G080200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 6217602-6218601 Glycine max
Glyma.17G080200 1.0kb downstream 1.0kb downstream 2045   true Chr17: 6215557-6217601 Glycine max
Glyma.17G080200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 6215557-6216556 Glycine max
Glyma.17G080200 2.0kb upstream 2.0kb upstream 3045   true Chr17: 6216557-6219601 Glycine max
Glyma.17G080200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 6217602-6219601 Glycine max
Glyma.17G080200 2.0kb downstream 2.0kb downstream 3045   true Chr17: 6214557-6217601 Glycine max
Glyma.17G080200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 6214557-6216556 Glycine max
Glyma.17G080200 5.0kb upstream 5.0kb upstream 6045   true Chr17: 6216557-6222601 Glycine max
Glyma.17G080200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 6217602-6222601 Glycine max
Glyma.17G080200 5.0kb downstream 5.0kb downstream 6045   true Chr17: 6211557-6217601 Glycine max
Glyma.17G080200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 6211557-6216556 Glycine max
Glyma.17G080200 10.0kb upstream 10.0kb upstream 11045   true Chr17: 6216557-6227601 Glycine max
Glyma.17G080200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 6217602-6227601 Glycine max
Glyma.17G080200 10.0kb downstream 10.0kb downstream 11045   true Chr17: 6206557-6217601 Glycine max
Glyma.17G080200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 6206557-6216556 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028984 5273 Angiosperm View MSA
122301110 5265 Fabidae View MSA
124050669 5270 Rosid View MSA
123744849 5271 Pentapetalae View MSA
122771270 5272 Eudicot View MSA
121351623 5274 Embryophyte View MSA
123428074 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.0607 0.0 60.1938   High
cufflinks 11.404 0.0 33.2684    
cufflinks 4.83404 0.0 16.0125    
cufflinks 6.69798 0.0 21.062    
cufflinks 4.38002 0.0 14.4723    
cufflinks 1.8232 0.0 6.56507   Low
cufflinks 6.15938 0.0 19.5033    
cufflinks 6.57107 0.0 20.663    
cufflinks 3.17601 0.0 10.9321    
cufflinks 2.289        
cufflinks 0.273       Low
cufflinks 1.483        
cufflinks 0.995        
cufflinks 1.623        
cufflinks 0.285       Low
cufflinks 10.91     High High
cufflinks 0.24       Low
cufflinks 1.803        
cufflinks 3.696        
cufflinks 10.286     High High
cufflinks 0.291       Low
cufflinks 10.019     High High
cufflinks 11.81     High High
cufflinks 0.237       Low
cufflinks 10.317     High High
cufflinks 0.211       Low

0 Strain