Gene : Glyma.17G081800 G. max Wm82.a2.v1
Defline:  (1 of 79) PF02701 - Dof domain, zinc finger (zf-Dof) Genomic Order:  818
Name:  ? Glyma.17G081800 Secondary Identifier:  ? PAC:30479134
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G081800 0.5kb upstream 0.5kb upstream 2342   true Chr17: 6348047-6350388 Glycine max
Glyma.17G081800 0.5kb upstream 0.5kb upstream 500   false Chr17: 6349889-6350388 Glycine max
Glyma.17G081800 0.5kb downstream 0.5kb downstream 2342   true Chr17: 6347547-6349888 Glycine max
Glyma.17G081800 0.5kb downstream 0.5kb downstream 500   false Chr17: 6347547-6348046 Glycine max
Glyma.17G081800 1.0kb upstream 1.0kb upstream 2842   true Chr17: 6348047-6350888 Glycine max
Glyma.17G081800 1.0kb upstream 1.0kb upstream 1000   false Chr17: 6349889-6350888 Glycine max
Glyma.17G081800 1.0kb downstream 1.0kb downstream 2842   true Chr17: 6347047-6349888 Glycine max
Glyma.17G081800 1.0kb downstream 1.0kb downstream 1000   false Chr17: 6347047-6348046 Glycine max
Glyma.17G081800 2.0kb upstream 2.0kb upstream 3842   true Chr17: 6348047-6351888 Glycine max
Glyma.17G081800 2.0kb upstream 2.0kb upstream 2000   false Chr17: 6349889-6351888 Glycine max
Glyma.17G081800 2.0kb downstream 2.0kb downstream 3842   true Chr17: 6346047-6349888 Glycine max
Glyma.17G081800 2.0kb downstream 2.0kb downstream 2000   false Chr17: 6346047-6348046 Glycine max
Glyma.17G081800 5.0kb upstream 5.0kb upstream 6842   true Chr17: 6348047-6354888 Glycine max
Glyma.17G081800 5.0kb upstream 5.0kb upstream 5000   false Chr17: 6349889-6354888 Glycine max
Glyma.17G081800 5.0kb downstream 5.0kb downstream 6842   true Chr17: 6343047-6349888 Glycine max
Glyma.17G081800 5.0kb downstream 5.0kb downstream 5000   false Chr17: 6343047-6348046 Glycine max
Glyma.17G081800 10.0kb upstream 10.0kb upstream 11842   true Chr17: 6348047-6359888 Glycine max
Glyma.17G081800 10.0kb upstream 10.0kb upstream 10000   false Chr17: 6349889-6359888 Glycine max
Glyma.17G081800 10.0kb downstream 10.0kb downstream 11842   true Chr17: 6338047-6349888 Glycine max
Glyma.17G081800 10.0kb downstream 10.0kb downstream 10000   false Chr17: 6338047-6348046 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310656 5265 Fabidae View MSA
124061595 5270 Rosid View MSA
123739205 5271 Pentapetalae View MSA
122790965 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.46718 0.0 25.9819   High
cufflinks 7.82838 0.0 21.8602    
cufflinks 3.9615 0.0 12.0638    
cufflinks 6.30244 0.0 17.9841    
cufflinks 4.49762 0.0 13.347    
cufflinks 4.02044 0.0 12.1413    
cufflinks 3.70825 0.0 11.3371    
cufflinks 12.996 0.0 35.0038   High
cufflinks 3.28843 0.0 10.2221   Low
cufflinks 11.352     High High
cufflinks 0.111       Low
cufflinks 4.346        
cufflinks 1.556        
cufflinks 0.838        
cufflinks 0.546        
cufflinks 4.513        
cufflinks 1.34        
cufflinks 7.686     High High
cufflinks 6.922        
cufflinks 4.358        
cufflinks 0.194       Low
cufflinks 5.21        
cufflinks 3.22        
cufflinks 0.08       Low
cufflinks 5.312        
cufflinks 0.194       Low

0 Strain