Gene : Glyma.17G082100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12565:SF153 - TRANSCRIPTION FACTOR BIM1 Genomic Order:  821
Name:  ? Glyma.17G082100 Secondary Identifier:  ? PAC:30479373
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G082100 0.5kb upstream 0.5kb upstream 9290   true Chr17: 6385766-6395055 Glycine max
Glyma.17G082100 0.5kb upstream 0.5kb upstream 500   false Chr17: 6394556-6395055 Glycine max
Glyma.17G082100 0.5kb downstream 0.5kb downstream 9290   true Chr17: 6385266-6394555 Glycine max
Glyma.17G082100 0.5kb downstream 0.5kb downstream 500   false Chr17: 6385266-6385765 Glycine max
Glyma.17G082100 1.0kb upstream 1.0kb upstream 9790   true Chr17: 6385766-6395555 Glycine max
Glyma.17G082100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 6394556-6395555 Glycine max
Glyma.17G082100 1.0kb downstream 1.0kb downstream 9790   true Chr17: 6384766-6394555 Glycine max
Glyma.17G082100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 6384766-6385765 Glycine max
Glyma.17G082100 2.0kb upstream 2.0kb upstream 10790   true Chr17: 6385766-6396555 Glycine max
Glyma.17G082100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 6394556-6396555 Glycine max
Glyma.17G082100 2.0kb downstream 2.0kb downstream 10790   true Chr17: 6383766-6394555 Glycine max
Glyma.17G082100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 6383766-6385765 Glycine max
Glyma.17G082100 5.0kb upstream 5.0kb upstream 13790   true Chr17: 6385766-6399555 Glycine max
Glyma.17G082100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 6394556-6399555 Glycine max
Glyma.17G082100 5.0kb downstream 5.0kb downstream 13790   true Chr17: 6380766-6394555 Glycine max
Glyma.17G082100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 6380766-6385765 Glycine max
Glyma.17G082100 10.0kb upstream 10.0kb upstream 18790   true Chr17: 6385766-6404555 Glycine max
Glyma.17G082100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 6394556-6404555 Glycine max
Glyma.17G082100 10.0kb downstream 10.0kb downstream 18790   true Chr17: 6375766-6394555 Glycine max
Glyma.17G082100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 6375766-6385765 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302462 5265 Fabidae View MSA
124066777 5270 Rosid View MSA
123738645 5271 Pentapetalae View MSA
122790983 5272 Eudicot View MSA
122046881 5273 Angiosperm View MSA
121348142 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.58881 0.0 17.3182    
cufflinks 3.6766 0.0 12.332    
cufflinks 1.95556 0.0 5.96424   Low
cufflinks 5.21805 0.0 16.3244    
cufflinks 12.1839 0.0 36.416    
cufflinks 23.9881 0.0 77.9188 High High
cufflinks 7.63879 0.0 23.0581    
cufflinks 5.34191 0.0 16.7236    
cufflinks 8.09966 0.0 24.2892    
cufflinks 1.845        
cufflinks 7.912     High High
cufflinks 2.285        
cufflinks 6.147        
cufflinks 5.027        
cufflinks 4.945        
cufflinks 1.326        
cufflinks 3.008        
cufflinks 4.185        
cufflinks 1.356        
cufflinks 0.841       Low
cufflinks 12.362     High High
cufflinks 0.948       Low
cufflinks 1.766        
cufflinks 3.394        
cufflinks 1.237       Low
cufflinks 12.259     High High

0 Strain