Gene : Glyma.17G083300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10285:SF76 - URIDINE KINASE Genomic Order:  833
Name:  ? Glyma.17G083300 Secondary Identifier:  ? PAC:30481852
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7193 Glycine max pathologic  
Gmax PWY-7196 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G083300 0.5kb upstream 0.5kb upstream 10309   true Chr17: 6459688-6469996 Glycine max
Glyma.17G083300 0.5kb upstream 0.5kb upstream 500   false Chr17: 6469497-6469996 Glycine max
Glyma.17G083300 0.5kb downstream 0.5kb downstream 10309   true Chr17: 6459188-6469496 Glycine max
Glyma.17G083300 0.5kb downstream 0.5kb downstream 500   false Chr17: 6459188-6459687 Glycine max
Glyma.17G083300 1.0kb upstream 1.0kb upstream 10809   true Chr17: 6459688-6470496 Glycine max
Glyma.17G083300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 6469497-6470496 Glycine max
Glyma.17G083300 1.0kb downstream 1.0kb downstream 10809   true Chr17: 6458688-6469496 Glycine max
Glyma.17G083300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 6458688-6459687 Glycine max
Glyma.17G083300 2.0kb upstream 2.0kb upstream 11809   true Chr17: 6459688-6471496 Glycine max
Glyma.17G083300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 6469497-6471496 Glycine max
Glyma.17G083300 2.0kb downstream 2.0kb downstream 11809   true Chr17: 6457688-6469496 Glycine max
Glyma.17G083300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 6457688-6459687 Glycine max
Glyma.17G083300 5.0kb upstream 5.0kb upstream 14809   true Chr17: 6459688-6474496 Glycine max
Glyma.17G083300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 6469497-6474496 Glycine max
Glyma.17G083300 5.0kb downstream 5.0kb downstream 14809   true Chr17: 6454688-6469496 Glycine max
Glyma.17G083300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 6454688-6459687 Glycine max
Glyma.17G083300 10.0kb upstream 10.0kb upstream 19809   true Chr17: 6459688-6479496 Glycine max
Glyma.17G083300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 6469497-6479496 Glycine max
Glyma.17G083300 10.0kb downstream 10.0kb downstream 19809   true Chr17: 6449688-6469496 Glycine max
Glyma.17G083300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 6449688-6459687 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300917 5265 Fabidae View MSA
124070976 5270 Rosid View MSA
123746405 5271 Pentapetalae View MSA
122786866 5272 Eudicot View MSA
122043584 5273 Angiosperm View MSA
121351427 5274 Embryophyte View MSA
123427517 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.6362 0.0 80.8125 High High
cufflinks 5.25683 0.0 18.5555    
cufflinks 12.8535 0.0 42.374    
cufflinks 9.19909 0.0 29.8654    
cufflinks 5.66609 0.0 19.893    
cufflinks 8.86065 0.0 29.1819    
cufflinks 10.6017 0.0 34.1869    
cufflinks 2.77578 0.0 9.64958   Low
cufflinks 6.21087 0.0 21.3689    
cufflinks 0.423       Low
cufflinks 1.12        
cufflinks 1.121        
cufflinks 0.873        
cufflinks 0.465       Low
cufflinks 0.995        
cufflinks 0.862        
cufflinks 1.022        
cufflinks 1.296        
cufflinks 0.964        
cufflinks 0.868        
cufflinks 1.287        
cufflinks 1.293        
cufflinks 0.806        
cufflinks 1.46       High
cufflinks 0.822        
cufflinks 1.385       High

0 Strain