Gene : Glyma.17G072000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31807:SF2 - HAUS AUGMIN-LIKE COMPLEX SUBUNIT 8 Genomic Order:  720
Name:  ? Glyma.17G072000 Secondary Identifier:  ? PAC:30479631
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G072000 0.5kb upstream 0.5kb upstream 6460   true Chr17: 5635942-5642401 Glycine max
Glyma.17G072000 0.5kb upstream 0.5kb upstream 500   false Chr17: 5635942-5636441 Glycine max
Glyma.17G072000 0.5kb downstream 0.5kb downstream 6460   true Chr17: 5636442-5642901 Glycine max
Glyma.17G072000 0.5kb downstream 0.5kb downstream 500   false Chr17: 5642402-5642901 Glycine max
Glyma.17G072000 1.0kb upstream 1.0kb upstream 6960   true Chr17: 5635442-5642401 Glycine max
Glyma.17G072000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 5635442-5636441 Glycine max
Glyma.17G072000 1.0kb downstream 1.0kb downstream 6960   true Chr17: 5636442-5643401 Glycine max
Glyma.17G072000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 5642402-5643401 Glycine max
Glyma.17G072000 2.0kb upstream 2.0kb upstream 7960   true Chr17: 5634442-5642401 Glycine max
Glyma.17G072000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 5634442-5636441 Glycine max
Glyma.17G072000 2.0kb downstream 2.0kb downstream 7960   true Chr17: 5636442-5644401 Glycine max
Glyma.17G072000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 5642402-5644401 Glycine max
Glyma.17G072000 5.0kb upstream 5.0kb upstream 10960   true Chr17: 5631442-5642401 Glycine max
Glyma.17G072000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 5631442-5636441 Glycine max
Glyma.17G072000 5.0kb downstream 5.0kb downstream 10960   true Chr17: 5636442-5647401 Glycine max
Glyma.17G072000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 5642402-5647401 Glycine max
Glyma.17G072000 10.0kb upstream 10.0kb upstream 15960   true Chr17: 5626442-5642401 Glycine max
Glyma.17G072000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 5626442-5636441 Glycine max
Glyma.17G072000 10.0kb downstream 10.0kb downstream 15960   true Chr17: 5636442-5652401 Glycine max
Glyma.17G072000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 5642402-5652401 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309736 5265 Fabidae View MSA
124066469 5270 Rosid View MSA
123747481 5271 Pentapetalae View MSA
122790294 5272 Eudicot View MSA
122050322 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.63453 0.0 16.1316    
cufflinks 4.72603 0.0 20.9823    
cufflinks 1.93072 0.0 11.8007   Low
cufflinks 14.0981 0.0 62.3079   High
cufflinks 6.77729 0.0 31.9479    
cufflinks 1.74308 0.0 10.0348   Low
cufflinks 5.56239 0.0 26.6917    
cufflinks 6.15782 0.0 29.4947    
cufflinks 10.1332 0.0 50.0068   High
cufflinks 0.337        
cufflinks 0.891       High
cufflinks 0.271        
cufflinks 0.213       Low
cufflinks 0.276        
cufflinks 0.822       High
cufflinks 0.442        
cufflinks 0.129       Low
cufflinks 0.958       High
cufflinks 0.38        
cufflinks 0.351        
cufflinks 0.609        
cufflinks 0.505        
cufflinks 0.37        
cufflinks 0.857       High
cufflinks 0.426        
cufflinks 0.234       Low

0 Strain