Gene : Glyma.17G072300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10938:SF0 - TRANSLATION INITIATION FACTOR IF-3, MITOCHONDRIAL Genomic Order:  723
Name:  ? Glyma.17G072300 Secondary Identifier:  ? PAC:30482502
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G072300 0.5kb upstream 0.5kb upstream 7186   true Chr17: 5652923-5660108 Glycine max
Glyma.17G072300 0.5kb upstream 0.5kb upstream 500   false Chr17: 5659609-5660108 Glycine max
Glyma.17G072300 0.5kb downstream 0.5kb downstream 7186   true Chr17: 5652423-5659608 Glycine max
Glyma.17G072300 0.5kb downstream 0.5kb downstream 500   false Chr17: 5652423-5652922 Glycine max
Glyma.17G072300 1.0kb upstream 1.0kb upstream 7686   true Chr17: 5652923-5660608 Glycine max
Glyma.17G072300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 5659609-5660608 Glycine max
Glyma.17G072300 1.0kb downstream 1.0kb downstream 7686   true Chr17: 5651923-5659608 Glycine max
Glyma.17G072300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 5651923-5652922 Glycine max
Glyma.17G072300 2.0kb upstream 2.0kb upstream 8686   true Chr17: 5652923-5661608 Glycine max
Glyma.17G072300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 5659609-5661608 Glycine max
Glyma.17G072300 2.0kb downstream 2.0kb downstream 8686   true Chr17: 5650923-5659608 Glycine max
Glyma.17G072300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 5650923-5652922 Glycine max
Glyma.17G072300 5.0kb upstream 5.0kb upstream 11686   true Chr17: 5652923-5664608 Glycine max
Glyma.17G072300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 5659609-5664608 Glycine max
Glyma.17G072300 5.0kb downstream 5.0kb downstream 11686   true Chr17: 5647923-5659608 Glycine max
Glyma.17G072300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 5647923-5652922 Glycine max
Glyma.17G072300 10.0kb upstream 10.0kb upstream 16686   true Chr17: 5652923-5669608 Glycine max
Glyma.17G072300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 5659609-5669608 Glycine max
Glyma.17G072300 10.0kb downstream 10.0kb downstream 16686   true Chr17: 5642923-5659608 Glycine max
Glyma.17G072300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 5642923-5652922 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302671 5265 Fabidae View MSA
124068567 5270 Rosid View MSA
123738585 5271 Pentapetalae View MSA
122786814 5272 Eudicot View MSA
122047018 5273 Angiosperm View MSA
121346506 5274 Embryophyte View MSA
123426932 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.2624 0.0 163.686 High High
cufflinks 12.6743 0.0 45.0802    
cufflinks 11.8896 0.0 42.3478    
cufflinks 10.6881 0.0 38.5176    
cufflinks 6.59234 0.0 27.062    
cufflinks 5.79883 0.0 20.4246    
cufflinks 6.47636 0.0 26.9408    
cufflinks 9.71132 0.0 35.7273    
cufflinks 5.07057 0.0 18.6467   Low
cufflinks 0.815        
cufflinks 1.08        
cufflinks 0.903        
cufflinks 0.346       Low
cufflinks 0.315       Low
cufflinks 0.612        
cufflinks 3.368       High
cufflinks 0.472        
cufflinks 0.683        
cufflinks 1.186        
cufflinks 4.191       High
cufflinks 0.874        
cufflinks 3.421       High
cufflinks 3.305       High
cufflinks 1.179        
cufflinks 3.727       High
cufflinks 0.519        

0 Strain