Gene : Glyma.17G073300 G. max Wm82.a2.v1
Defline:  (1 of 2) PF04086 - Signal recognition particle, alpha subunit, N-terminal (SRP-alpha_N) Genomic Order:  733
Name:  ? Glyma.17G073300 Secondary Identifier:  ? PAC:30481744
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G073300 0.5kb upstream 0.5kb upstream 4476   true Chr17: 5732132-5736607 Glycine max
Glyma.17G073300 0.5kb upstream 0.5kb upstream 500   false Chr17: 5732132-5732631 Glycine max
Glyma.17G073300 0.5kb downstream 0.5kb downstream 4476   true Chr17: 5732632-5737107 Glycine max
Glyma.17G073300 0.5kb downstream 0.5kb downstream 500   false Chr17: 5736608-5737107 Glycine max
Glyma.17G073300 1.0kb upstream 1.0kb upstream 4976   true Chr17: 5731632-5736607 Glycine max
Glyma.17G073300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 5731632-5732631 Glycine max
Glyma.17G073300 1.0kb downstream 1.0kb downstream 4976   true Chr17: 5732632-5737607 Glycine max
Glyma.17G073300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 5736608-5737607 Glycine max
Glyma.17G073300 2.0kb upstream 2.0kb upstream 5976   true Chr17: 5730632-5736607 Glycine max
Glyma.17G073300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 5730632-5732631 Glycine max
Glyma.17G073300 2.0kb downstream 2.0kb downstream 5976   true Chr17: 5732632-5738607 Glycine max
Glyma.17G073300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 5736608-5738607 Glycine max
Glyma.17G073300 5.0kb upstream 5.0kb upstream 8976   true Chr17: 5727632-5736607 Glycine max
Glyma.17G073300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 5727632-5732631 Glycine max
Glyma.17G073300 5.0kb downstream 5.0kb downstream 8976   true Chr17: 5732632-5741607 Glycine max
Glyma.17G073300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 5736608-5741607 Glycine max
Glyma.17G073300 10.0kb upstream 10.0kb upstream 13976   true Chr17: 5722632-5736607 Glycine max
Glyma.17G073300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 5722632-5732631 Glycine max
Glyma.17G073300 10.0kb downstream 10.0kb downstream 13976   true Chr17: 5732632-5746607 Glycine max
Glyma.17G073300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 5736608-5746607 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311012 5265 Fabidae View MSA
124061133 5270 Rosid View MSA
123748391 5271 Pentapetalae View MSA
122789994 5272 Eudicot View MSA
122043067 5273 Angiosperm View MSA
121346015 5274 Embryophyte View MSA
123425096 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 51.1844 0.0 152.949 High High
cufflinks 21.7911 0.0 59.1807 High Low
cufflinks 24.5397 0.0 67.178 High  
cufflinks 26.5945 0.0 73.3828 High  
cufflinks 38.2683 0.0 109.994 High  
cufflinks 42.9951 0.0 125.31 High  
cufflinks 34.4576 0.0 97.5318 High  
cufflinks 21.7895 0.0 59.2216 High Low
cufflinks 45.1545 0.0 132.462 High High
cufflinks 33.993     High  
cufflinks 69.186     High High
cufflinks 24.448     High Low
cufflinks 34.857     High  
cufflinks 28.522     High  
cufflinks 73.792     High High
cufflinks 41.406     High  
cufflinks 84.958     High High
cufflinks 23.169     High Low
cufflinks 23.383     High Low
cufflinks 41.585     High  
cufflinks 54.674     High  
cufflinks 42.483     High  
cufflinks 38.488     High  
cufflinks 73.65     High High
cufflinks 35.791     High  
cufflinks 79.861     High High

0 Strain