Gene : Glyma.17G075100 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR11387 - CYTOCHROME C OXIDASE POLYPEPTIDE VIB Genomic Order:  751
Name:  ? Glyma.17G075100 Secondary Identifier:  ? PAC:30479152
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G075100 0.5kb upstream 0.5kb upstream 1398   true Chr17: 5893498-5894895 Glycine max
Glyma.17G075100 0.5kb upstream 0.5kb upstream 500   false Chr17: 5893498-5893997 Glycine max
Glyma.17G075100 0.5kb downstream 0.5kb downstream 1398   true Chr17: 5893998-5895395 Glycine max
Glyma.17G075100 0.5kb downstream 0.5kb downstream 500   false Chr17: 5894896-5895395 Glycine max
Glyma.17G075100 1.0kb upstream 1.0kb upstream 1898   true Chr17: 5892998-5894895 Glycine max
Glyma.17G075100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 5892998-5893997 Glycine max
Glyma.17G075100 1.0kb downstream 1.0kb downstream 1898   true Chr17: 5893998-5895895 Glycine max
Glyma.17G075100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 5894896-5895895 Glycine max
Glyma.17G075100 2.0kb upstream 2.0kb upstream 2898   true Chr17: 5891998-5894895 Glycine max
Glyma.17G075100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 5891998-5893997 Glycine max
Glyma.17G075100 2.0kb downstream 2.0kb downstream 2898   true Chr17: 5893998-5896895 Glycine max
Glyma.17G075100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 5894896-5896895 Glycine max
Glyma.17G075100 5.0kb upstream 5.0kb upstream 5898   true Chr17: 5888998-5894895 Glycine max
Glyma.17G075100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 5888998-5893997 Glycine max
Glyma.17G075100 5.0kb downstream 5.0kb downstream 5898   true Chr17: 5893998-5899895 Glycine max
Glyma.17G075100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 5894896-5899895 Glycine max
Glyma.17G075100 10.0kb upstream 10.0kb upstream 10898   true Chr17: 5883998-5894895 Glycine max
Glyma.17G075100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 5883998-5893997 Glycine max
Glyma.17G075100 10.0kb downstream 10.0kb downstream 10898   true Chr17: 5893998-5904895 Glycine max
Glyma.17G075100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 5894896-5904895 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304645 5265 Fabidae View MSA
124064279 5270 Rosid View MSA
123737563 5271 Pentapetalae View MSA
122793935 5272 Eudicot View MSA
122042745 5273 Angiosperm View MSA
121350001 5274 Embryophyte View MSA
123426527 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.538268 0.0 2.1573    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0485206 0.0 0.233289 Low Low
cufflinks 0.142383 0.0 0.614797 Low  
cufflinks 3.66231 0.0 13.5296   High
cufflinks 0.149418 0.0 0.643531 Low  
cufflinks 0.520915 0.0 2.08604    
cufflinks 0.0901584 0.0 0.407417 Low  
cufflinks 1.979       High
cufflinks 1.093        
cufflinks 0.912        
cufflinks 1.266        
cufflinks 1.558        
cufflinks 0.484       Low
cufflinks 1.496        
cufflinks 0.778        
cufflinks 1.101        
cufflinks 1.099        
cufflinks 1.395        
cufflinks 0.573       Low
cufflinks 1.401        
cufflinks 1.543        
cufflinks 0.732        
cufflinks 1.259        
cufflinks 0.724       Low

0 Strain