Gene : Glyma.17G076100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11177:SF219 - CHITINASE-LIKE PROTEIN-RELATED Genomic Order:  761
Name:  ? Glyma.17G076100 Secondary Identifier:  ? PAC:30479440
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G076100 0.5kb upstream 0.5kb upstream 2126   true Chr17: 5959148-5961273 Glycine max
Glyma.17G076100 0.5kb upstream 0.5kb upstream 500   false Chr17: 5959148-5959647 Glycine max
Glyma.17G076100 0.5kb downstream 0.5kb downstream 2126   true Chr17: 5959648-5961773 Glycine max
Glyma.17G076100 0.5kb downstream 0.5kb downstream 500   false Chr17: 5961274-5961773 Glycine max
Glyma.17G076100 1.0kb upstream 1.0kb upstream 2626   true Chr17: 5958648-5961273 Glycine max
Glyma.17G076100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 5958648-5959647 Glycine max
Glyma.17G076100 1.0kb downstream 1.0kb downstream 2626   true Chr17: 5959648-5962273 Glycine max
Glyma.17G076100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 5961274-5962273 Glycine max
Glyma.17G076100 2.0kb upstream 2.0kb upstream 3626   true Chr17: 5957648-5961273 Glycine max
Glyma.17G076100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 5957648-5959647 Glycine max
Glyma.17G076100 2.0kb downstream 2.0kb downstream 3626   true Chr17: 5959648-5963273 Glycine max
Glyma.17G076100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 5961274-5963273 Glycine max
Glyma.17G076100 5.0kb upstream 5.0kb upstream 6626   true Chr17: 5954648-5961273 Glycine max
Glyma.17G076100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 5954648-5959647 Glycine max
Glyma.17G076100 5.0kb downstream 5.0kb downstream 6626   true Chr17: 5959648-5966273 Glycine max
Glyma.17G076100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 5961274-5966273 Glycine max
Glyma.17G076100 10.0kb upstream 10.0kb upstream 11626   true Chr17: 5949648-5961273 Glycine max
Glyma.17G076100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 5949648-5959647 Glycine max
Glyma.17G076100 10.0kb downstream 10.0kb downstream 11626   true Chr17: 5959648-5971273 Glycine max
Glyma.17G076100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 5961274-5971273 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311378 5265 Fabidae View MSA
124068556 5270 Rosid View MSA
123750744 5271 Pentapetalae View MSA
122797322 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.51848 0.0 1.94476    
cufflinks 2.11565 0.0 7.21268    
cufflinks 2.09987 0.0 7.14487    
cufflinks 1.30186 0.0 4.63195    
cufflinks 0.0147101 0.0 0.0675807 Low Low
cufflinks 2.27519 0.0 7.68068    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.36138 0.0 13.4866    
cufflinks 0.0514026 0.0 0.212777 Low Low
cufflinks 1.852        
cufflinks 0.147        
cufflinks 5.857       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.041     Low Low
cufflinks 0.059       Low
cufflinks 0.964        
cufflinks 0.102       Low
cufflinks 3.114       High
cufflinks 2.876       High
cufflinks 0.705        
cufflinks 0.172        
cufflinks 0.911        
cufflinks 0.763        
cufflinks 0.274        
cufflinks 0.303        
cufflinks 0.509        

0 Strain