Gene : Glyma.17G076300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31471:SF8 - GB Genomic Order:  763
Name:  ? Glyma.17G076300 Secondary Identifier:  ? PAC:30481354
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G076300 0.5kb upstream 0.5kb upstream 2489   true Chr17: 5969541-5972029 Glycine max
Glyma.17G076300 0.5kb upstream 0.5kb upstream 500   false Chr17: 5971530-5972029 Glycine max
Glyma.17G076300 0.5kb downstream 0.5kb downstream 2489   true Chr17: 5969041-5971529 Glycine max
Glyma.17G076300 0.5kb downstream 0.5kb downstream 500   false Chr17: 5969041-5969540 Glycine max
Glyma.17G076300 1.0kb upstream 1.0kb upstream 2989   true Chr17: 5969541-5972529 Glycine max
Glyma.17G076300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 5971530-5972529 Glycine max
Glyma.17G076300 1.0kb downstream 1.0kb downstream 2989   true Chr17: 5968541-5971529 Glycine max
Glyma.17G076300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 5968541-5969540 Glycine max
Glyma.17G076300 2.0kb upstream 2.0kb upstream 3989   true Chr17: 5969541-5973529 Glycine max
Glyma.17G076300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 5971530-5973529 Glycine max
Glyma.17G076300 2.0kb downstream 2.0kb downstream 3989   true Chr17: 5967541-5971529 Glycine max
Glyma.17G076300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 5967541-5969540 Glycine max
Glyma.17G076300 5.0kb upstream 5.0kb upstream 6989   true Chr17: 5969541-5976529 Glycine max
Glyma.17G076300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 5971530-5976529 Glycine max
Glyma.17G076300 5.0kb downstream 5.0kb downstream 6989   true Chr17: 5964541-5971529 Glycine max
Glyma.17G076300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 5964541-5969540 Glycine max
Glyma.17G076300 10.0kb upstream 10.0kb upstream 11989   true Chr17: 5969541-5981529 Glycine max
Glyma.17G076300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 5971530-5981529 Glycine max
Glyma.17G076300 10.0kb downstream 10.0kb downstream 11989   true Chr17: 5959541-5971529 Glycine max
Glyma.17G076300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 5959541-5969540 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250622 5265 Fabidae View MSA
123993752 5270 Rosid View MSA
123743301 5271 Pentapetalae View MSA
122785962 5272 Eudicot View MSA
122046152 5273 Angiosperm View MSA
121351512 5274 Embryophyte View MSA
123382200 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.314468 0.0 1.19594   High
cufflinks 0.166303 0.0 0.649868 Low  
cufflinks 0.272421 0.0 1.04117    
cufflinks 0.173352 0.0 0.675542 Low  
cufflinks 0.25463 0.0 0.977344    
cufflinks 0.213152 0.0 0.824663 Low  
cufflinks 0.113584 0.0 0.450202 Low Low
cufflinks 0.22367 0.0 0.86293 Low  
cufflinks 0.340845 0.0 1.29139   High
cufflinks 0.311        
cufflinks 0.133       Low
cufflinks 0.32        
cufflinks 0.665       High
cufflinks 0.487       High
cufflinks 0.247        
cufflinks 0.217        
cufflinks 0.121       Low
cufflinks 0.322        
cufflinks 0.272        
cufflinks 0.276        
cufflinks 0.171        
cufflinks 0.253        
cufflinks 0.285        
cufflinks 0.167       Low
cufflinks 0.356        
cufflinks 0.222        

0 Strain