Gene : Glyma.17G064400 G. max Wm82.a2.v1
Defline:  (1 of 8) 6.2.1.34 - Trans-feruloyl-CoA synthase / Trans-feruloyl-CoA synthetase Genomic Order:  644
Name:  ? Glyma.17G064400 Secondary Identifier:  ? PAC:30479944
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1121 Glycine max pathologic  
Gmax PWY1F-FLAVSYN Glycine max pathologic  
Gmax PWY-361 Glycine max pathologic  
Gmax PWY-6435 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G064400 0.5kb upstream 0.5kb upstream 5177   true Chr17: 4952229-4957405 Glycine max
Glyma.17G064400 0.5kb upstream 0.5kb upstream 500   false Chr17: 4952229-4952728 Glycine max
Glyma.17G064400 0.5kb downstream 0.5kb downstream 5177   true Chr17: 4952729-4957905 Glycine max
Glyma.17G064400 0.5kb downstream 0.5kb downstream 500   false Chr17: 4957406-4957905 Glycine max
Glyma.17G064400 1.0kb upstream 1.0kb upstream 5677   true Chr17: 4951729-4957405 Glycine max
Glyma.17G064400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 4951729-4952728 Glycine max
Glyma.17G064400 1.0kb downstream 1.0kb downstream 5677   true Chr17: 4952729-4958405 Glycine max
Glyma.17G064400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 4957406-4958405 Glycine max
Glyma.17G064400 2.0kb upstream 2.0kb upstream 6677   true Chr17: 4950729-4957405 Glycine max
Glyma.17G064400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 4950729-4952728 Glycine max
Glyma.17G064400 2.0kb downstream 2.0kb downstream 6677   true Chr17: 4952729-4959405 Glycine max
Glyma.17G064400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 4957406-4959405 Glycine max
Glyma.17G064400 5.0kb upstream 5.0kb upstream 9677   true Chr17: 4947729-4957405 Glycine max
Glyma.17G064400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 4947729-4952728 Glycine max
Glyma.17G064400 5.0kb downstream 5.0kb downstream 9677   true Chr17: 4952729-4962405 Glycine max
Glyma.17G064400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 4957406-4962405 Glycine max
Glyma.17G064400 10.0kb upstream 10.0kb upstream 14677   true Chr17: 4942729-4957405 Glycine max
Glyma.17G064400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 4942729-4952728 Glycine max
Glyma.17G064400 10.0kb downstream 10.0kb downstream 14677   true Chr17: 4952729-4967405 Glycine max
Glyma.17G064400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 4957406-4967405 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305962 5265 Fabidae View MSA
124064969 5270 Rosid View MSA
123741286 5271 Pentapetalae View MSA
122790673 5272 Eudicot View MSA
122048251 5273 Angiosperm View MSA
121345883 5274 Embryophyte View MSA
123380283 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.2263 0.0 9.76005   High
cufflinks 1.85909 0.0 6.09318   High
cufflinks 0.402596 0.0 1.49888    
cufflinks 0.836484 0.0 2.97662    
cufflinks 0.0270504 0.0 0.113202 Low Low
cufflinks 0.0407217 0.0 0.166492 Low Low
cufflinks 0.27332 0.0 1.03295    
cufflinks 0.668183 0.0 2.41366    
cufflinks 0.0759258 0.0 0.30223 Low  
cufflinks 0.101        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.317        
cufflinks 0.04     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.357        
cufflinks 0.006     Low Low
cufflinks 0.39        
cufflinks 0.41        
cufflinks 2.249        
cufflinks 0.004     Low Low
cufflinks 2.689       High
cufflinks 2.084        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.514       High
cufflinks 0.011     Low Low

0 Strain