Gene : Glyma.17G065400 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR31062:SF32 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 25-RELATED Genomic Order:  654
Name:  ? Glyma.17G065400 Secondary Identifier:  ? PAC:30479692
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G065400 0.5kb upstream 0.5kb upstream 1977   true Chr17: 5044975-5046951 Glycine max
Glyma.17G065400 0.5kb upstream 0.5kb upstream 500   false Chr17: 5044975-5045474 Glycine max
Glyma.17G065400 0.5kb downstream 0.5kb downstream 1977   true Chr17: 5045475-5047451 Glycine max
Glyma.17G065400 0.5kb downstream 0.5kb downstream 500   false Chr17: 5046952-5047451 Glycine max
Glyma.17G065400 1.0kb upstream 1.0kb upstream 2477   true Chr17: 5044475-5046951 Glycine max
Glyma.17G065400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 5044475-5045474 Glycine max
Glyma.17G065400 1.0kb downstream 1.0kb downstream 2477   true Chr17: 5045475-5047951 Glycine max
Glyma.17G065400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 5046952-5047951 Glycine max
Glyma.17G065400 2.0kb upstream 2.0kb upstream 3477   true Chr17: 5043475-5046951 Glycine max
Glyma.17G065400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 5043475-5045474 Glycine max
Glyma.17G065400 2.0kb downstream 2.0kb downstream 3477   true Chr17: 5045475-5048951 Glycine max
Glyma.17G065400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 5046952-5048951 Glycine max
Glyma.17G065400 5.0kb upstream 5.0kb upstream 6477   true Chr17: 5040475-5046951 Glycine max
Glyma.17G065400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 5040475-5045474 Glycine max
Glyma.17G065400 5.0kb downstream 5.0kb downstream 6477   true Chr17: 5045475-5051951 Glycine max
Glyma.17G065400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 5046952-5051951 Glycine max
Glyma.17G065400 10.0kb upstream 10.0kb upstream 11477   true Chr17: 5035475-5046951 Glycine max
Glyma.17G065400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 5035475-5045474 Glycine max
Glyma.17G065400 10.0kb downstream 10.0kb downstream 11477   true Chr17: 5045475-5056951 Glycine max
Glyma.17G065400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 5046952-5056951 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314173 5265 Fabidae View MSA
124074397 5270 Rosid View MSA
123749278 5271 Pentapetalae View MSA
122796709 5272 Eudicot View MSA
122046395 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.134883 0.0 0.536893 Low  
cufflinks 0.73033 0.0 2.70893   High
cufflinks 0.280052 0.0 1.08253    
cufflinks 0.308293 0.0 1.1879    
cufflinks 0.1463 0.0 0.580524 Low  
cufflinks 0.1435 0.0 0.569915 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.11533 0.0 4.02815   High
cufflinks 0.0189201 0.0 0.0855754 Low Low
cufflinks 24.008     High High
cufflinks 2.145        
cufflinks 2.483        
cufflinks 0.394        
cufflinks 0.194       Low
cufflinks 8.018     High High
cufflinks 2.166        
cufflinks 4.685        
cufflinks 6.913       High
cufflinks 0.356        
cufflinks 0.38        
cufflinks 0.931        
cufflinks 0.499        
cufflinks 1.184        
cufflinks 0.413        
cufflinks 0.436        
cufflinks 1.995        

0 Strain