Gene : Glyma.17G067500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12818:SF0 - NEF-ASSOCIATED PROTEIN 1 Genomic Order:  675
Name:  ? Glyma.17G067500 Secondary Identifier:  ? PAC:30478884
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G067500 0.5kb upstream 0.5kb upstream 4878   true Chr17: 5224837-5229714 Glycine max
Glyma.17G067500 0.5kb upstream 0.5kb upstream 500   false Chr17: 5229215-5229714 Glycine max
Glyma.17G067500 0.5kb downstream 0.5kb downstream 4878   true Chr17: 5224337-5229214 Glycine max
Glyma.17G067500 0.5kb downstream 0.5kb downstream 500   false Chr17: 5224337-5224836 Glycine max
Glyma.17G067500 1.0kb upstream 1.0kb upstream 5378   true Chr17: 5224837-5230214 Glycine max
Glyma.17G067500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 5229215-5230214 Glycine max
Glyma.17G067500 1.0kb downstream 1.0kb downstream 5378   true Chr17: 5223837-5229214 Glycine max
Glyma.17G067500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 5223837-5224836 Glycine max
Glyma.17G067500 2.0kb upstream 2.0kb upstream 6378   true Chr17: 5224837-5231214 Glycine max
Glyma.17G067500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 5229215-5231214 Glycine max
Glyma.17G067500 2.0kb downstream 2.0kb downstream 6378   true Chr17: 5222837-5229214 Glycine max
Glyma.17G067500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 5222837-5224836 Glycine max
Glyma.17G067500 5.0kb upstream 5.0kb upstream 9378   true Chr17: 5224837-5234214 Glycine max
Glyma.17G067500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 5229215-5234214 Glycine max
Glyma.17G067500 5.0kb downstream 5.0kb downstream 9378   true Chr17: 5219837-5229214 Glycine max
Glyma.17G067500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 5219837-5224836 Glycine max
Glyma.17G067500 10.0kb upstream 10.0kb upstream 14378   true Chr17: 5224837-5239214 Glycine max
Glyma.17G067500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 5229215-5239214 Glycine max
Glyma.17G067500 10.0kb downstream 10.0kb downstream 14378   true Chr17: 5214837-5229214 Glycine max
Glyma.17G067500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 5214837-5224836 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305602 5265 Fabidae View MSA
124061130 5270 Rosid View MSA
123737004 5271 Pentapetalae View MSA
122788525 5272 Eudicot View MSA
122041749 5273 Angiosperm View MSA
121344113 5274 Embryophyte View MSA
123423900 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.16838 0.0 27.4112    
cufflinks 6.19359 0.0 39.6288   High
cufflinks 4.88657 0.0 26.549    
cufflinks 4.97142 0.0 41.1825    
cufflinks 4.66957 0.0 36.7907    
cufflinks 5.02486 0.0 40.5468    
cufflinks 4.75513 0.0 38.6938    
cufflinks 7.19427 0.0 52.7475   High
cufflinks 5.49195 0.0 34.4115    
cufflinks 0.369        
cufflinks 0.101       Low
cufflinks 0.358        
cufflinks 0.28        
cufflinks 0.353        
cufflinks 0.253        
cufflinks 0.543        
cufflinks 0.128       Low
cufflinks 0.451        
cufflinks 0.481        
cufflinks 0.589       High
cufflinks 0.143       Low
cufflinks 0.578       High
cufflinks 0.54        
cufflinks 0.114       Low
cufflinks 0.532        
cufflinks 0.168        

0 Strain