Gene : Glyma.17G069300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR32191:SF2 - TETRASPANIN-11-RELATED Genomic Order:  693
Name:  ? Glyma.17G069300 Secondary Identifier:  ? PAC:30481205
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G069300 0.5kb upstream 0.5kb upstream 3196   true Chr17: 5440359-5443554 Glycine max
Glyma.17G069300 0.5kb upstream 0.5kb upstream 500   false Chr17: 5443055-5443554 Glycine max
Glyma.17G069300 0.5kb downstream 0.5kb downstream 3196   true Chr17: 5439859-5443054 Glycine max
Glyma.17G069300 0.5kb downstream 0.5kb downstream 500   false Chr17: 5439859-5440358 Glycine max
Glyma.17G069300 1.0kb upstream 1.0kb upstream 3696   true Chr17: 5440359-5444054 Glycine max
Glyma.17G069300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 5443055-5444054 Glycine max
Glyma.17G069300 1.0kb downstream 1.0kb downstream 3696   true Chr17: 5439359-5443054 Glycine max
Glyma.17G069300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 5439359-5440358 Glycine max
Glyma.17G069300 2.0kb upstream 2.0kb upstream 4696   true Chr17: 5440359-5445054 Glycine max
Glyma.17G069300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 5443055-5445054 Glycine max
Glyma.17G069300 2.0kb downstream 2.0kb downstream 4696   true Chr17: 5438359-5443054 Glycine max
Glyma.17G069300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 5438359-5440358 Glycine max
Glyma.17G069300 5.0kb upstream 5.0kb upstream 7696   true Chr17: 5440359-5448054 Glycine max
Glyma.17G069300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 5443055-5448054 Glycine max
Glyma.17G069300 5.0kb downstream 5.0kb downstream 7696   true Chr17: 5435359-5443054 Glycine max
Glyma.17G069300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 5435359-5440358 Glycine max
Glyma.17G069300 10.0kb upstream 10.0kb upstream 12696   true Chr17: 5440359-5453054 Glycine max
Glyma.17G069300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 5443055-5453054 Glycine max
Glyma.17G069300 10.0kb downstream 10.0kb downstream 12696   true Chr17: 5430359-5443054 Glycine max
Glyma.17G069300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 5430359-5440358 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028680 5273 Angiosperm View MSA
122305713 5265 Fabidae View MSA
124065583 5270 Rosid View MSA
123742672 5271 Pentapetalae View MSA
122788817 5272 Eudicot View MSA
121346783 5274 Embryophyte View MSA
123380444 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.6056 0.0 29.9042    
cufflinks 4.07721 0.0 13.067    
cufflinks 9.18146 0.0 26.3388    
cufflinks 17.173 0.0 46.5694    
cufflinks 2.21945 0.0 7.64979    
cufflinks 2.61246 0.0 8.86385    
cufflinks 277.035 0.0 964.427 High High
cufflinks 44.7244 0.0 120.316 High  
cufflinks 2.31076 0.0 7.93936    
cufflinks 13.077     High High
cufflinks 11.839     High High
cufflinks 4.783        
cufflinks 1.013        
cufflinks 0.223       Low
cufflinks 1.608        
cufflinks 1.442        
cufflinks 33.745     High High
cufflinks 5.932        
cufflinks 1.523        
cufflinks 0.996        
cufflinks 4.725        
cufflinks 0.798        
cufflinks 1.362        
cufflinks 6.909     High  
cufflinks 0.903        
cufflinks 11.533     High High

0 Strain