Gene : Glyma.17G069400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11387:SF15 - CYTOCHROME C OXIDASE SUBUNIT 6B-1 Genomic Order:  694
Name:  ? Glyma.17G069400 Secondary Identifier:  ? PAC:30480099
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3781 Glycine max pathologic  
Gmax PWY-7279 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G069400 0.5kb upstream 0.5kb upstream 3495   true Chr17: 5447543-5451037 Glycine max
Glyma.17G069400 0.5kb upstream 0.5kb upstream 500   false Chr17: 5450538-5451037 Glycine max
Glyma.17G069400 0.5kb downstream 0.5kb downstream 3495   true Chr17: 5447043-5450537 Glycine max
Glyma.17G069400 0.5kb downstream 0.5kb downstream 500   false Chr17: 5447043-5447542 Glycine max
Glyma.17G069400 1.0kb upstream 1.0kb upstream 3995   true Chr17: 5447543-5451537 Glycine max
Glyma.17G069400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 5450538-5451537 Glycine max
Glyma.17G069400 1.0kb downstream 1.0kb downstream 3995   true Chr17: 5446543-5450537 Glycine max
Glyma.17G069400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 5446543-5447542 Glycine max
Glyma.17G069400 2.0kb upstream 2.0kb upstream 4995   true Chr17: 5447543-5452537 Glycine max
Glyma.17G069400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 5450538-5452537 Glycine max
Glyma.17G069400 2.0kb downstream 2.0kb downstream 4995   true Chr17: 5445543-5450537 Glycine max
Glyma.17G069400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 5445543-5447542 Glycine max
Glyma.17G069400 5.0kb upstream 5.0kb upstream 7995   true Chr17: 5447543-5455537 Glycine max
Glyma.17G069400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 5450538-5455537 Glycine max
Glyma.17G069400 5.0kb downstream 5.0kb downstream 7995   true Chr17: 5442543-5450537 Glycine max
Glyma.17G069400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 5442543-5447542 Glycine max
Glyma.17G069400 10.0kb upstream 10.0kb upstream 12995   true Chr17: 5447543-5460537 Glycine max
Glyma.17G069400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 5450538-5460537 Glycine max
Glyma.17G069400 10.0kb downstream 10.0kb downstream 12995   true Chr17: 5437543-5450537 Glycine max
Glyma.17G069400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 5437543-5447542 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309733 5265 Fabidae View MSA
124068898 5270 Rosid View MSA
123741112 5271 Pentapetalae View MSA
122785907 5272 Eudicot View MSA
122042170 5273 Angiosperm View MSA
121351047 5274 Embryophyte View MSA
123424784 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.5497 0.0 113.699 High  
cufflinks 25.6832 0.0 87.4185 High  
cufflinks 26.8943 0.0 90.478 High  
cufflinks 32.7369 0.0 107.253 High  
cufflinks 55.1002 0.0 167.285 High  
cufflinks 141.841 0.0 390.405 High High
cufflinks 31.4059 0.0 103.286 High  
cufflinks 50.3472 0.0 154.703 High  
cufflinks 84.5751 0.0 243.457 High High
cufflinks 6.231        
cufflinks 8.816     High High
cufflinks 4.178        
cufflinks 11.944     High High
cufflinks 10.742     High High
cufflinks 4.061        
cufflinks 2.634       Low
cufflinks 5.466        
cufflinks 5.477        
cufflinks 3.213        
cufflinks 2.354       Low
cufflinks 7.719     High  
cufflinks 2.434       Low
cufflinks 2.314       Low
cufflinks 9.403     High High
cufflinks 2.675       Low
cufflinks 7.928     High  

0 Strain