Gene : Glyma.17G069900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12169:SF6 - LACTATION ELEVATED PROTEIN 1 Genomic Order:  699
Name:  ? Glyma.17G069900 Secondary Identifier:  ? PAC:30478989
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax ANAGLYCOLYSIS-PWY Glycine max pathologic  
Gmax GLUCOSE1PMETAB-PWY Glycine max pathologic  
Gmax PWY-621 Glycine max pathologic  
Gmax PWY-7238 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G069900 0.5kb upstream 0.5kb upstream 6779   true Chr17: 5482805-5489583 Glycine max
Glyma.17G069900 0.5kb upstream 0.5kb upstream 500   false Chr17: 5489084-5489583 Glycine max
Glyma.17G069900 0.5kb downstream 0.5kb downstream 6779   true Chr17: 5482305-5489083 Glycine max
Glyma.17G069900 0.5kb downstream 0.5kb downstream 500   false Chr17: 5482305-5482804 Glycine max
Glyma.17G069900 1.0kb upstream 1.0kb upstream 7279   true Chr17: 5482805-5490083 Glycine max
Glyma.17G069900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 5489084-5490083 Glycine max
Glyma.17G069900 1.0kb downstream 1.0kb downstream 7279   true Chr17: 5481805-5489083 Glycine max
Glyma.17G069900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 5481805-5482804 Glycine max
Glyma.17G069900 2.0kb upstream 2.0kb upstream 8279   true Chr17: 5482805-5491083 Glycine max
Glyma.17G069900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 5489084-5491083 Glycine max
Glyma.17G069900 2.0kb downstream 2.0kb downstream 8279   true Chr17: 5480805-5489083 Glycine max
Glyma.17G069900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 5480805-5482804 Glycine max
Glyma.17G069900 5.0kb upstream 5.0kb upstream 11279   true Chr17: 5482805-5494083 Glycine max
Glyma.17G069900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 5489084-5494083 Glycine max
Glyma.17G069900 5.0kb downstream 5.0kb downstream 11279   true Chr17: 5477805-5489083 Glycine max
Glyma.17G069900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 5477805-5482804 Glycine max
Glyma.17G069900 10.0kb upstream 10.0kb upstream 16279   true Chr17: 5482805-5499083 Glycine max
Glyma.17G069900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 5489084-5499083 Glycine max
Glyma.17G069900 10.0kb downstream 10.0kb downstream 16279   true Chr17: 5472805-5489083 Glycine max
Glyma.17G069900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 5472805-5482804 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304744 5265 Fabidae View MSA
124061792 5270 Rosid View MSA
123752091 5271 Pentapetalae View MSA
122793026 5272 Eudicot View MSA
122047660 5273 Angiosperm View MSA
121344773 5274 Embryophyte View MSA
123427307 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.15685 0.0 22.609    
cufflinks 5.33081 0.0 17.3733    
cufflinks 10.2481 0.0 35.3585    
cufflinks 4.06667 0.0 14.0988   Low
cufflinks 7.41377 0.0 22.9366    
cufflinks 24.0257 0.0 85.6522 High High
cufflinks 3.72527 0.0 13.4158   Low
cufflinks 7.25832 0.0 25.8771    
cufflinks 8.29074 0.0 29.0863    
cufflinks 2.736        
cufflinks 1.778        
cufflinks 2.268        
cufflinks 3.18       High
cufflinks 2.174        
cufflinks 0.587       Low
cufflinks 1.091        
cufflinks 5.406       High
cufflinks 1.942        
cufflinks 1.692        
cufflinks 1.147        
cufflinks 1.329        
cufflinks 1.293        
cufflinks 1.351        
cufflinks 1.672        
cufflinks 1.13        
cufflinks 3.989       High

0 Strain